Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 ACTG1P17-201ENST00000558391 1119 ntBASIC15.65■□□□□ 0.1
SYNPOQ8N3V7 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.65■□□□□ 0.1
SYNPOQ8N3V7 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC15.65■□□□□ 0.1
SYNPOQ8N3V7 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.65■□□□□ 0.1
SYNPOQ8N3V7 AL021578.1-201ENST00000613646 709 ntBASIC15.65■□□□□ 0.1
SYNPOQ8N3V7 AL096828.3-201ENST00000615354 462 ntBASIC15.65■□□□□ 0.1
SYNPOQ8N3V7 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
SYNPOQ8N3V7 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.65■□□□□ 0.1
SYNPOQ8N3V7 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SYNPOQ8N3V7 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SYNPOQ8N3V7 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SYNPOQ8N3V7 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.65■□□□□ 0.1
SYNPOQ8N3V7 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.65■□□□□ 0.1
SYNPOQ8N3V7 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SYNPOQ8N3V7 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SYNPOQ8N3V7 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SYNPOQ8N3V7 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SYNPOQ8N3V7 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.65■□□□□ 0.1
SYNPOQ8N3V7 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.65■□□□□ 0.1
SYNPOQ8N3V7 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
SYNPOQ8N3V7 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.64■□□□□ 0.1
SYNPOQ8N3V7 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
SYNPOQ8N3V7 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.64■□□□□ 0.1
SYNPOQ8N3V7 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SYNPOQ8N3V7 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SYNPOQ8N3V7 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SYNPOQ8N3V7 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SYNPOQ8N3V7 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
SYNPOQ8N3V7 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SYNPOQ8N3V7 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SYNPOQ8N3V7 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SYNPOQ8N3V7 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SYNPOQ8N3V7 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.64■□□□□ 0.09
SYNPOQ8N3V7 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SYNPOQ8N3V7 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SYNPOQ8N3V7 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SYNPOQ8N3V7 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SYNPOQ8N3V7 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SYNPOQ8N3V7 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.64■□□□□ 0.09
SYNPOQ8N3V7 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SYNPOQ8N3V7 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
SYNPOQ8N3V7 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SYNPOQ8N3V7 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.64■□□□□ 0.09
SYNPOQ8N3V7 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.64■□□□□ 0.09
SYNPOQ8N3V7 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC15.64■□□□□ 0.09
SYNPOQ8N3V7 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.64■□□□□ 0.09
SYNPOQ8N3V7 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SYNPOQ8N3V7 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.64■□□□□ 0.09
SYNPOQ8N3V7 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SYNPOQ8N3V7 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.64■□□□□ 0.09
SYNPOQ8N3V7 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.64■□□□□ 0.09
SYNPOQ8N3V7 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.64■□□□□ 0.09
SYNPOQ8N3V7 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SYNPOQ8N3V7 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.64■□□□□ 0.09
SYNPOQ8N3V7 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.64■□□□□ 0.09
SYNPOQ8N3V7 AC244157.2-201ENST00000616239 1006 ntBASIC15.64■□□□□ 0.09
SYNPOQ8N3V7 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SYNPOQ8N3V7 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SYNPOQ8N3V7 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SYNPOQ8N3V7 AC018892.3-201ENST00000623986 2499 ntBASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 RNU1-114P-201ENST00000365297 166 ntBASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 HSPB1P2-201ENST00000448722 546 ntBASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 REEP1-202ENST00000453231 940 ntTSL 2 BASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 MIR3619-201ENST00000579667 83 ntBASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SYNPOQ8N3V7 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms