Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CCDC60Q8IWA6 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC60Q8IWA6 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CCDC60Q8IWA6 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CCDC60Q8IWA6 C18orf15-201ENST00000623680 2534 ntBASIC17.06■□□□□ 0.32
CCDC60Q8IWA6 REXO1L4P-201ENST00000605109 1937 ntBASIC17.06■□□□□ 0.32
CCDC60Q8IWA6 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC60Q8IWA6 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC60Q8IWA6 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC60Q8IWA6 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC60Q8IWA6 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC60Q8IWA6 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC60Q8IWA6 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.06■□□□□ 0.32
CCDC60Q8IWA6 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC60Q8IWA6 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.06■□□□□ 0.32
CCDC60Q8IWA6 RNA5SP486-201ENST00000515961 83 ntBASIC17.06■□□□□ 0.32
CCDC60Q8IWA6 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC60Q8IWA6 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC60Q8IWA6 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.06■□□□□ 0.32
CCDC60Q8IWA6 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.06■□□□□ 0.32
CCDC60Q8IWA6 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CCDC60Q8IWA6 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC60Q8IWA6 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC60Q8IWA6 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC60Q8IWA6 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC60Q8IWA6 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC60Q8IWA6 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC60Q8IWA6 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC60Q8IWA6 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC60Q8IWA6 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC60Q8IWA6 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC60Q8IWA6 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC60Q8IWA6 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC60Q8IWA6 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC60Q8IWA6 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 RN7SL48P-201ENST00000579283 293 ntBASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC60Q8IWA6 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CCDC60Q8IWA6 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC60Q8IWA6 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
CCDC60Q8IWA6 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC60Q8IWA6 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC60Q8IWA6 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC60Q8IWA6 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC60Q8IWA6 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC60Q8IWA6 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC60Q8IWA6 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CCDC60Q8IWA6 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CCDC60Q8IWA6 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.04■□□□□ 0.32
CCDC60Q8IWA6 FAM21FP-201ENST00000426241 1131 ntBASIC17.04■□□□□ 0.32
CCDC60Q8IWA6 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC60Q8IWA6 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC60Q8IWA6 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC60Q8IWA6 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC60Q8IWA6 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC60Q8IWA6 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms