Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.65■□□□□ 0.26
HERC6Q8IVU3 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.65■□□□□ 0.26
HERC6Q8IVU3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
HERC6Q8IVU3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HERC6Q8IVU3 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
HERC6Q8IVU3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HERC6Q8IVU3 FER1L4-210ENST00000615531 5998 ntBASIC16.64■□□□□ 0.25
HERC6Q8IVU3 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.64■□□□□ 0.25
HERC6Q8IVU3 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.64■□□□□ 0.25
HERC6Q8IVU3 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.64■□□□□ 0.25
HERC6Q8IVU3 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HERC6Q8IVU3 AC079328.2-201ENST00000561241 3354 ntBASIC16.64■□□□□ 0.25
HERC6Q8IVU3 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
HERC6Q8IVU3 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HERC6Q8IVU3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.64■□□□□ 0.25
HERC6Q8IVU3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HERC6Q8IVU3 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HERC6Q8IVU3 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HERC6Q8IVU3 MPV17-204ENST00000399052 749 ntTSL 4 BASIC16.64■□□□□ 0.25
HERC6Q8IVU3 AL008707.1-201ENST00000422498 534 ntBASIC16.64■□□□□ 0.25
HERC6Q8IVU3 FAM8A4P-201ENST00000435433 1213 ntBASIC16.64■□□□□ 0.25
HERC6Q8IVU3 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.64■□□□□ 0.25
HERC6Q8IVU3 Z97180.1-201ENST00000445173 988 ntBASIC16.64■□□□□ 0.25
HERC6Q8IVU3 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.64■□□□□ 0.25
HERC6Q8IVU3 FGFR3P5-201ENST00000564496 886 ntBASIC16.64■□□□□ 0.25
HERC6Q8IVU3 PPY2P-201ENST00000582808 702 ntBASIC16.64■□□□□ 0.25
HERC6Q8IVU3 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HERC6Q8IVU3 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC16.64■□□□□ 0.25
HERC6Q8IVU3 MIR7845-201ENST00000618396 99 ntBASIC16.64■□□□□ 0.25
HERC6Q8IVU3 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HERC6Q8IVU3 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HERC6Q8IVU3 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.64■□□□□ 0.25
HERC6Q8IVU3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HERC6Q8IVU3 AC006449.6-201ENST00000612330 2296 ntBASIC16.64■□□□□ 0.25
HERC6Q8IVU3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HERC6Q8IVU3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HERC6Q8IVU3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.64■□□□□ 0.25
HERC6Q8IVU3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HERC6Q8IVU3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HERC6Q8IVU3 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HERC6Q8IVU3 LRRC59-203ENST00000576448 1531 ntBASIC16.64■□□□□ 0.25
HERC6Q8IVU3 TUBBP5-203ENST00000508529 1334 ntBASIC16.64■□□□□ 0.25
HERC6Q8IVU3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.64■□□□□ 0.25
HERC6Q8IVU3 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.64■□□□□ 0.25
HERC6Q8IVU3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HERC6Q8IVU3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HERC6Q8IVU3 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HERC6Q8IVU3 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HERC6Q8IVU3 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HERC6Q8IVU3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HERC6Q8IVU3 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC16.63■□□□□ 0.25
HERC6Q8IVU3 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
HERC6Q8IVU3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.63■□□□□ 0.25
HERC6Q8IVU3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.63■□□□□ 0.25
HERC6Q8IVU3 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HERC6Q8IVU3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
HERC6Q8IVU3 AL513477.1-201ENST00000602865 2407 ntBASIC16.63■□□□□ 0.25
HERC6Q8IVU3 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HERC6Q8IVU3 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HERC6Q8IVU3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HERC6Q8IVU3 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
HERC6Q8IVU3 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HERC6Q8IVU3 IGF1-203ENST00000392904 761 ntTSL 5 BASIC16.63■□□□□ 0.25
HERC6Q8IVU3 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
HERC6Q8IVU3 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HERC6Q8IVU3 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HERC6Q8IVU3 FTLP1-201ENST00000449155 526 ntBASIC16.63■□□□□ 0.25
HERC6Q8IVU3 RN7SL11P-201ENST00000471305 293 ntBASIC16.63■□□□□ 0.25
HERC6Q8IVU3 AC134698.3-201ENST00000523880 214 ntBASIC16.63■□□□□ 0.25
HERC6Q8IVU3 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC16.63■□□□□ 0.25
HERC6Q8IVU3 MBP-227ENST00000526111 581 ntTSL 4 BASIC16.63■□□□□ 0.25
HERC6Q8IVU3 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HERC6Q8IVU3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.63■□□□□ 0.25
HERC6Q8IVU3 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HERC6Q8IVU3 PRSS30P-206ENST00000641773 873 ntBASIC16.63■□□□□ 0.25
HERC6Q8IVU3 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
HERC6Q8IVU3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.63■□□□□ 0.25
HERC6Q8IVU3 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
HERC6Q8IVU3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.63■□□□□ 0.25
HERC6Q8IVU3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HERC6Q8IVU3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
HERC6Q8IVU3 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HERC6Q8IVU3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.63■□□□□ 0.25
HERC6Q8IVU3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HERC6Q8IVU3 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
HERC6Q8IVU3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HERC6Q8IVU3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HERC6Q8IVU3 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms