Protein–RNA interactions for Protein: Q7RTS3

PTF1A, Pancreas transcription factor 1 subunit alpha, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1AQ7RTS3 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 ILF3-AS1-201ENST00000591501 1983 ntBASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTF1AQ7RTS3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC19.36■□□□□ 0.69
PTF1AQ7RTS3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
PTF1AQ7RTS3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
PTF1AQ7RTS3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC19.36■□□□□ 0.69
PTF1AQ7RTS3 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
PTF1AQ7RTS3 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTF1AQ7RTS3 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTF1AQ7RTS3 FRMPD2B-201ENST00000431305 1347 ntBASIC19.36■□□□□ 0.69
PTF1AQ7RTS3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
PTF1AQ7RTS3 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTF1AQ7RTS3 AL592076.1-201ENST00000424448 303 ntBASIC19.36■□□□□ 0.69
PTF1AQ7RTS3 POLD4-208ENST00000532830 904 ntTSL 3 BASIC19.36■□□□□ 0.69
PTF1AQ7RTS3 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PTF1AQ7RTS3 TPM1-223ENST00000560445 485 ntTSL 3 BASIC19.36■□□□□ 0.69
PTF1AQ7RTS3 AL118516.1-201ENST00000564152 670 ntBASIC19.36■□□□□ 0.69
PTF1AQ7RTS3 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTF1AQ7RTS3 MIR3180-2-201ENST00000581748 88 ntBASIC19.36■□□□□ 0.69
PTF1AQ7RTS3 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC19.36■□□□□ 0.69
PTF1AQ7RTS3 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC19.36■□□□□ 0.69
PTF1AQ7RTS3 MIR6720-201ENST00000611664 98 ntBASIC19.36■□□□□ 0.69
PTF1AQ7RTS3 FO393412.1-201ENST00000619841 382 ntBASIC19.36■□□□□ 0.69
PTF1AQ7RTS3 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTF1AQ7RTS3 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC19.36■□□□□ 0.69
PTF1AQ7RTS3 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTF1AQ7RTS3 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC19.36■□□□□ 0.69
PTF1AQ7RTS3 STK26-204ENST00000481105 1835 ntTSL 2 BASIC19.36■□□□□ 0.69
PTF1AQ7RTS3 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTF1AQ7RTS3 AC092127.1-201ENST00000567093 3455 ntBASIC19.36■□□□□ 0.69
PTF1AQ7RTS3 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTF1AQ7RTS3 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTF1AQ7RTS3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTF1AQ7RTS3 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTF1AQ7RTS3 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTF1AQ7RTS3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTF1AQ7RTS3 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PTF1AQ7RTS3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.35■□□□□ 0.69
PTF1AQ7RTS3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PTF1AQ7RTS3 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTF1AQ7RTS3 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC19.35■□□□□ 0.69
PTF1AQ7RTS3 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTF1AQ7RTS3 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTF1AQ7RTS3 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PTF1AQ7RTS3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PTF1AQ7RTS3 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTF1AQ7RTS3 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PTF1AQ7RTS3 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
PTF1AQ7RTS3 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC19.35■□□□□ 0.69
PTF1AQ7RTS3 AGPAT5P1-201ENST00000455855 1019 ntBASIC19.35■□□□□ 0.69
PTF1AQ7RTS3 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTF1AQ7RTS3 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC19.35■□□□□ 0.69
PTF1AQ7RTS3 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC19.35■□□□□ 0.69
PTF1AQ7RTS3 LINC01783-202ENST00000614408 828 ntBASIC19.35■□□□□ 0.69
PTF1AQ7RTS3 BX284668.2-205ENST00000619677 828 ntBASIC19.35■□□□□ 0.69
PTF1AQ7RTS3 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC19.35■□□□□ 0.69
PTF1AQ7RTS3 DDX5-235ENST00000630471 473 ntTSL 4 BASIC19.35■□□□□ 0.69
PTF1AQ7RTS3 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PTF1AQ7RTS3 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC19.35■□□□□ 0.69
PTF1AQ7RTS3 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC19.35■□□□□ 0.69
PTF1AQ7RTS3 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
PTF1AQ7RTS3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTF1AQ7RTS3 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PTF1AQ7RTS3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.35■□□□□ 0.69
PTF1AQ7RTS3 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC19.35■□□□□ 0.69
PTF1AQ7RTS3 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTF1AQ7RTS3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
PTF1AQ7RTS3 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTF1AQ7RTS3 PES1-204ENST00000402284 2144 ntTSL 5 BASIC19.34■□□□□ 0.69
PTF1AQ7RTS3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTF1AQ7RTS3 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTF1AQ7RTS3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PTF1AQ7RTS3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTF1AQ7RTS3 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTF1AQ7RTS3 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTF1AQ7RTS3 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PTF1AQ7RTS3 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTF1AQ7RTS3 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PTF1AQ7RTS3 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC19.34■□□□□ 0.69
PTF1AQ7RTS3 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC19.34■□□□□ 0.69
PTF1AQ7RTS3 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PTF1AQ7RTS3 NEU3-207ENST00000534628 746 ntTSL 2 BASIC19.34■□□□□ 0.69
PTF1AQ7RTS3 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC19.34■□□□□ 0.69
PTF1AQ7RTS3 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC19.34■□□□□ 0.69
PTF1AQ7RTS3 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC19.34■□□□□ 0.69
PTF1AQ7RTS3 DGAT2L7P-201ENST00000602462 744 ntBASIC19.34■□□□□ 0.69
PTF1AQ7RTS3 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
PTF1AQ7RTS3 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTF1AQ7RTS3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTF1AQ7RTS3 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms