Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SHFQ7M4L6 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SHFQ7M4L6 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.04□□□□□ -0.16
SHFQ7M4L6 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SHFQ7M4L6 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SHFQ7M4L6 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHFQ7M4L6 ACE3P-201ENST00000423435 1973 ntBASIC14.03□□□□□ -0.16
SHFQ7M4L6 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SHFQ7M4L6 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHFQ7M4L6 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.03□□□□□ -0.16
SHFQ7M4L6 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHFQ7M4L6 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHFQ7M4L6 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.03□□□□□ -0.16
SHFQ7M4L6 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SHFQ7M4L6 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHFQ7M4L6 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SHFQ7M4L6 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHFQ7M4L6 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHFQ7M4L6 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SHFQ7M4L6 AC023274.1-201ENST00000418278 595 ntBASIC14.03□□□□□ -0.16
SHFQ7M4L6 MCCD1P2-201ENST00000423228 335 ntBASIC14.03□□□□□ -0.16
SHFQ7M4L6 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.03□□□□□ -0.16
SHFQ7M4L6 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.03□□□□□ -0.16
SHFQ7M4L6 AC079140.1-201ENST00000508039 487 ntBASIC14.03□□□□□ -0.16
SHFQ7M4L6 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.03□□□□□ -0.16
SHFQ7M4L6 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.03□□□□□ -0.16
SHFQ7M4L6 LINC01225-203ENST00000563550 1244 ntBASIC14.03□□□□□ -0.16
SHFQ7M4L6 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.03□□□□□ -0.16
SHFQ7M4L6 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHFQ7M4L6 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.03□□□□□ -0.16
SHFQ7M4L6 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SHFQ7M4L6 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.03□□□□□ -0.16
SHFQ7M4L6 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.03□□□□□ -0.16
SHFQ7M4L6 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
SHFQ7M4L6 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHFQ7M4L6 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.03□□□□□ -0.16
SHFQ7M4L6 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.03□□□□□ -0.16
SHFQ7M4L6 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHFQ7M4L6 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SHFQ7M4L6 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHFQ7M4L6 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHFQ7M4L6 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
SHFQ7M4L6 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHFQ7M4L6 AC097359.2-201ENST00000604992 2389 ntBASIC14.03□□□□□ -0.16
SHFQ7M4L6 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHFQ7M4L6 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
SHFQ7M4L6 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.03□□□□□ -0.16
SHFQ7M4L6 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
SHFQ7M4L6 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHFQ7M4L6 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHFQ7M4L6 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SHFQ7M4L6 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SHFQ7M4L6 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SHFQ7M4L6 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
SHFQ7M4L6 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
SHFQ7M4L6 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SHFQ7M4L6 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
SHFQ7M4L6 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SHFQ7M4L6 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
SHFQ7M4L6 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
SHFQ7M4L6 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SHFQ7M4L6 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SHFQ7M4L6 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SHFQ7M4L6 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.02□□□□□ -0.16
SHFQ7M4L6 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SHFQ7M4L6 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SHFQ7M4L6 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.02□□□□□ -0.16
SHFQ7M4L6 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SHFQ7M4L6 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SHFQ7M4L6 YBX2P1-201ENST00000394192 760 ntBASIC14.02□□□□□ -0.17
SHFQ7M4L6 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.02□□□□□ -0.17
SHFQ7M4L6 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
SHFQ7M4L6 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.02□□□□□ -0.17
SHFQ7M4L6 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.02□□□□□ -0.17
SHFQ7M4L6 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.02□□□□□ -0.17
SHFQ7M4L6 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.02□□□□□ -0.17
SHFQ7M4L6 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.02□□□□□ -0.17
SHFQ7M4L6 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.02□□□□□ -0.17
SHFQ7M4L6 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SHFQ7M4L6 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SHFQ7M4L6 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SHFQ7M4L6 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.02□□□□□ -0.17
SHFQ7M4L6 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SHFQ7M4L6 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.02□□□□□ -0.17
SHFQ7M4L6 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SHFQ7M4L6 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SHFQ7M4L6 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
SHFQ7M4L6 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SHFQ7M4L6 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SHFQ7M4L6 PTENP1-202ENST00000532280 3996 ntBASIC14.02□□□□□ -0.17
SHFQ7M4L6 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SHFQ7M4L6 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SHFQ7M4L6 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SHFQ7M4L6 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SHFQ7M4L6 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SHFQ7M4L6 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.02□□□□□ -0.17
SHFQ7M4L6 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
SHFQ7M4L6 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SHFQ7M4L6 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
SHFQ7M4L6 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms