Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
VPS13CQ709C8 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VPS13CQ709C8 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VPS13CQ709C8 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VPS13CQ709C8 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
VPS13CQ709C8 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC12.55□□□□□ -0.4
VPS13CQ709C8 MESTP3-201ENST00000503460 968 ntBASIC12.55□□□□□ -0.4
VPS13CQ709C8 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.55□□□□□ -0.4
VPS13CQ709C8 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
VPS13CQ709C8 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VPS13CQ709C8 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VPS13CQ709C8 IL9RP3-201ENST00000442856 1674 ntBASIC12.55□□□□□ -0.4
VPS13CQ709C8 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
VPS13CQ709C8 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC12.55□□□□□ -0.4
VPS13CQ709C8 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VPS13CQ709C8 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
VPS13CQ709C8 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC12.55□□□□□ -0.4
VPS13CQ709C8 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VPS13CQ709C8 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC12.54□□□□□ -0.4
VPS13CQ709C8 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC12.54□□□□□ -0.4
VPS13CQ709C8 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC12.54□□□□□ -0.4
VPS13CQ709C8 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VPS13CQ709C8 HPN-206ENST00000597419 1212 ntTSL 5 BASIC12.54□□□□□ -0.4
VPS13CQ709C8 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC12.54□□□□□ -0.4
VPS13CQ709C8 OR10B1P-201ENST00000601666 907 ntBASIC12.54□□□□□ -0.4
VPS13CQ709C8 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VPS13CQ709C8 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VPS13CQ709C8 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
VPS13CQ709C8 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VPS13CQ709C8 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VPS13CQ709C8 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC12.54□□□□□ -0.4
VPS13CQ709C8 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC12.54□□□□□ -0.4
VPS13CQ709C8 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
VPS13CQ709C8 AP002414.2-201ENST00000591780 3365 ntBASIC12.54□□□□□ -0.4
VPS13CQ709C8 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VPS13CQ709C8 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC12.54□□□□□ -0.4
VPS13CQ709C8 AC138466.3-201ENST00000619983 221 ntBASIC12.54□□□□□ -0.4
VPS13CQ709C8 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VPS13CQ709C8 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VPS13CQ709C8 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VPS13CQ709C8 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VPS13CQ709C8 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
VPS13CQ709C8 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VPS13CQ709C8 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VPS13CQ709C8 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC12.54□□□□□ -0.4
VPS13CQ709C8 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12.54□□□□□ -0.4
VPS13CQ709C8 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VPS13CQ709C8 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
VPS13CQ709C8 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VPS13CQ709C8 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
VPS13CQ709C8 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VPS13CQ709C8 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC12.54□□□□□ -0.4
VPS13CQ709C8 C2orf69P1-201ENST00000563532 1093 ntBASIC12.54□□□□□ -0.4
VPS13CQ709C8 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
VPS13CQ709C8 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.54□□□□□ -0.4
VPS13CQ709C8 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VPS13CQ709C8 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VPS13CQ709C8 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VPS13CQ709C8 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.53□□□□□ -0.4
VPS13CQ709C8 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VPS13CQ709C8 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
VPS13CQ709C8 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VPS13CQ709C8 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VPS13CQ709C8 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VPS13CQ709C8 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC12.53□□□□□ -0.4
VPS13CQ709C8 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.53□□□□□ -0.4
VPS13CQ709C8 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.53□□□□□ -0.4
VPS13CQ709C8 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC12.53□□□□□ -0.4
VPS13CQ709C8 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VPS13CQ709C8 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VPS13CQ709C8 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.53□□□□□ -0.4
VPS13CQ709C8 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.53□□□□□ -0.4
VPS13CQ709C8 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VPS13CQ709C8 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
VPS13CQ709C8 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VPS13CQ709C8 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VPS13CQ709C8 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VPS13CQ709C8 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
VPS13CQ709C8 LINC01165-201ENST00000445190 1623 ntBASIC12.53□□□□□ -0.4
VPS13CQ709C8 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VPS13CQ709C8 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC12.53□□□□□ -0.4
VPS13CQ709C8 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
VPS13CQ709C8 RN7SKP175-201ENST00000408472 289 ntBASIC12.53□□□□□ -0.4
VPS13CQ709C8 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC12.53□□□□□ -0.4
VPS13CQ709C8 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC12.53□□□□□ -0.4
VPS13CQ709C8 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC12.53□□□□□ -0.4
VPS13CQ709C8 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.53□□□□□ -0.4
VPS13CQ709C8 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.53□□□□□ -0.4
VPS13CQ709C8 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC12.53□□□□□ -0.4
VPS13CQ709C8 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC12.53□□□□□ -0.4
VPS13CQ709C8 AC138696.2-201ENST00000607376 223 ntBASIC12.53□□□□□ -0.4
VPS13CQ709C8 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC12.53□□□□□ -0.4
VPS13CQ709C8 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VPS13CQ709C8 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VPS13CQ709C8 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
VPS13CQ709C8 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
VPS13CQ709C8 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC12.53□□□□□ -0.4
VPS13CQ709C8 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
VPS13CQ709C8 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VPS13CQ709C8 AC008805.1-201ENST00000590892 364 ntBASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms