Protein–RNA interactions for Protein: Q6P3S1

DENND1B, DENN domain-containing protein 1B, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1BQ6P3S1 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.31■□□□□ 0.2
DENND1BQ6P3S1 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DENND1BQ6P3S1 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DENND1BQ6P3S1 INTS4P2-202ENST00000614726 2019 ntBASIC16.31■□□□□ 0.2
DENND1BQ6P3S1 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DENND1BQ6P3S1 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DENND1BQ6P3S1 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
DENND1BQ6P3S1 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DENND1BQ6P3S1 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
DENND1BQ6P3S1 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
DENND1BQ6P3S1 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DENND1BQ6P3S1 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
DENND1BQ6P3S1 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DENND1BQ6P3S1 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DENND1BQ6P3S1 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
DENND1BQ6P3S1 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DENND1BQ6P3S1 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.31■□□□□ 0.2
DENND1BQ6P3S1 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
DENND1BQ6P3S1 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.31■□□□□ 0.2
DENND1BQ6P3S1 AC134915.1-201ENST00000426461 574 ntBASIC16.31■□□□□ 0.2
DENND1BQ6P3S1 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.31■□□□□ 0.2
DENND1BQ6P3S1 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.31■□□□□ 0.2
DENND1BQ6P3S1 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.31■□□□□ 0.2
DENND1BQ6P3S1 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.31■□□□□ 0.2
DENND1BQ6P3S1 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DENND1BQ6P3S1 AC138761.1-201ENST00000584393 385 ntBASIC16.31■□□□□ 0.2
DENND1BQ6P3S1 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.31■□□□□ 0.2
DENND1BQ6P3S1 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.31■□□□□ 0.2
DENND1BQ6P3S1 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DENND1BQ6P3S1 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
DENND1BQ6P3S1 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DENND1BQ6P3S1 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.31■□□□□ 0.2
DENND1BQ6P3S1 REXO1L2P-201ENST00000425429 2069 ntBASIC16.31■□□□□ 0.2
DENND1BQ6P3S1 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DENND1BQ6P3S1 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
DENND1BQ6P3S1 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DENND1BQ6P3S1 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
DENND1BQ6P3S1 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.3■□□□□ 0.2
DENND1BQ6P3S1 AL138799.1-201ENST00000448213 1675 ntBASIC16.3■□□□□ 0.2
DENND1BQ6P3S1 AC006058.4-201ENST00000624016 1670 ntBASIC16.3■□□□□ 0.2
DENND1BQ6P3S1 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DENND1BQ6P3S1 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
DENND1BQ6P3S1 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.3■□□□□ 0.2
DENND1BQ6P3S1 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
DENND1BQ6P3S1 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.3■□□□□ 0.2
DENND1BQ6P3S1 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DENND1BQ6P3S1 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DENND1BQ6P3S1 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DENND1BQ6P3S1 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DENND1BQ6P3S1 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DENND1BQ6P3S1 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.3■□□□□ 0.2
DENND1BQ6P3S1 AC124283.3-201ENST00000570869 594 ntBASIC16.3■□□□□ 0.2
DENND1BQ6P3S1 AC140912.1-201ENST00000577171 1054 ntBASIC16.3■□□□□ 0.2
DENND1BQ6P3S1 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
DENND1BQ6P3S1 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
DENND1BQ6P3S1 TMEM261P1-201ENST00000604899 340 ntBASIC16.3■□□□□ 0.2
DENND1BQ6P3S1 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DENND1BQ6P3S1 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.3■□□□□ 0.2
DENND1BQ6P3S1 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
DENND1BQ6P3S1 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DENND1BQ6P3S1 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.3■□□□□ 0.2
DENND1BQ6P3S1 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DENND1BQ6P3S1 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
DENND1BQ6P3S1 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DENND1BQ6P3S1 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
DENND1BQ6P3S1 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.3■□□□□ 0.2
DENND1BQ6P3S1 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
DENND1BQ6P3S1 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
DENND1BQ6P3S1 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.3■□□□□ 0.2
DENND1BQ6P3S1 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DENND1BQ6P3S1 AC007787.1-201ENST00000588095 1583 ntBASIC16.3■□□□□ 0.2
DENND1BQ6P3S1 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.3■□□□□ 0.2
DENND1BQ6P3S1 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DENND1BQ6P3S1 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DENND1BQ6P3S1 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
DENND1BQ6P3S1 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DENND1BQ6P3S1 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.29■□□□□ 0.2
DENND1BQ6P3S1 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
DENND1BQ6P3S1 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.29■□□□□ 0.2
DENND1BQ6P3S1 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DENND1BQ6P3S1 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DENND1BQ6P3S1 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
DENND1BQ6P3S1 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
DENND1BQ6P3S1 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
DENND1BQ6P3S1 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DENND1BQ6P3S1 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
DENND1BQ6P3S1 AC063926.3-201ENST00000624734 5658 ntBASIC16.29■□□□□ 0.2
DENND1BQ6P3S1 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DENND1BQ6P3S1 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DENND1BQ6P3S1 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
DENND1BQ6P3S1 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DENND1BQ6P3S1 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
DENND1BQ6P3S1 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DENND1BQ6P3S1 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DENND1BQ6P3S1 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DENND1BQ6P3S1 DGCR5-201ENST00000399539 862 ntBASIC16.29■□□□□ 0.2
DENND1BQ6P3S1 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.29■□□□□ 0.2
DENND1BQ6P3S1 CRB3P1-201ENST00000449338 276 ntBASIC16.29■□□□□ 0.2
DENND1BQ6P3S1 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.29■□□□□ 0.2
DENND1BQ6P3S1 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms