Protein–RNA interactions for Protein: Q16610

ECM1, Extracellular matrix protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1Q16610 AL162726.2-201ENST00000438986 1017 ntBASIC17.11■□□□□ 0.33
ECM1Q16610 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ECM1Q16610 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.11■□□□□ 0.33
ECM1Q16610 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.11■□□□□ 0.33
ECM1Q16610 AC027307.3-201ENST00000594262 1100 ntBASIC17.11■□□□□ 0.33
ECM1Q16610 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.11■□□□□ 0.33
ECM1Q16610 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.11■□□□□ 0.33
ECM1Q16610 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ECM1Q16610 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.11■□□□□ 0.33
ECM1Q16610 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.11■□□□□ 0.33
ECM1Q16610 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.11■□□□□ 0.33
ECM1Q16610 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ECM1Q16610 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ECM1Q16610 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ECM1Q16610 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ECM1Q16610 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.11■□□□□ 0.33
ECM1Q16610 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ECM1Q16610 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
ECM1Q16610 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ECM1Q16610 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ECM1Q16610 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ECM1Q16610 AC103702.1-201ENST00000548801 2630 ntBASIC17.11■□□□□ 0.33
ECM1Q16610 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.11■□□□□ 0.33
ECM1Q16610 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ECM1Q16610 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ECM1Q16610 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.11■□□□□ 0.33
ECM1Q16610 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ECM1Q16610 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ECM1Q16610 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ECM1Q16610 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ECM1Q16610 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ECM1Q16610 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.1■□□□□ 0.33
ECM1Q16610 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ECM1Q16610 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ECM1Q16610 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ECM1Q16610 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ECM1Q16610 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.1■□□□□ 0.33
ECM1Q16610 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.1■□□□□ 0.33
ECM1Q16610 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC17.1■□□□□ 0.33
ECM1Q16610 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.1■□□□□ 0.33
ECM1Q16610 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ECM1Q16610 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ECM1Q16610 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ECM1Q16610 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.1■□□□□ 0.33
ECM1Q16610 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.1■□□□□ 0.33
ECM1Q16610 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.1■□□□□ 0.33
ECM1Q16610 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ECM1Q16610 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.1■□□□□ 0.33
ECM1Q16610 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.1■□□□□ 0.33
ECM1Q16610 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ECM1Q16610 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.1■□□□□ 0.33
ECM1Q16610 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.1■□□□□ 0.33
ECM1Q16610 MIR5189-201ENST00000577370 114 ntBASIC17.1■□□□□ 0.33
ECM1Q16610 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.1■□□□□ 0.33
ECM1Q16610 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.1■□□□□ 0.33
ECM1Q16610 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.1■□□□□ 0.33
ECM1Q16610 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.1■□□□□ 0.33
ECM1Q16610 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.1■□□□□ 0.33
ECM1Q16610 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ECM1Q16610 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ECM1Q16610 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC17.1■□□□□ 0.33
ECM1Q16610 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.1■□□□□ 0.33
ECM1Q16610 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ECM1Q16610 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.1■□□□□ 0.33
ECM1Q16610 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ECM1Q16610 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ECM1Q16610 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.1■□□□□ 0.33
ECM1Q16610 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ECM1Q16610 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.1■□□□□ 0.33
ECM1Q16610 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ECM1Q16610 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.09■□□□□ 0.33
ECM1Q16610 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ECM1Q16610 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ECM1Q16610 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ECM1Q16610 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.09■□□□□ 0.33
ECM1Q16610 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
ECM1Q16610 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
ECM1Q16610 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
ECM1Q16610 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
ECM1Q16610 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ECM1Q16610 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.09■□□□□ 0.33
ECM1Q16610 KLF2P2-201ENST00000416807 1039 ntBASIC17.09■□□□□ 0.33
ECM1Q16610 ACTG1P3-201ENST00000431775 1114 ntBASIC17.09■□□□□ 0.33
ECM1Q16610 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ECM1Q16610 AC005225.4-201ENST00000557330 545 ntBASIC17.09■□□□□ 0.33
ECM1Q16610 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
ECM1Q16610 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.09■□□□□ 0.33
ECM1Q16610 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.09■□□□□ 0.33
ECM1Q16610 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.09■□□□□ 0.33
ECM1Q16610 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ECM1Q16610 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ECM1Q16610 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ECM1Q16610 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.09■□□□□ 0.33
ECM1Q16610 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ECM1Q16610 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.09■□□□□ 0.33
ECM1Q16610 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ECM1Q16610 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ECM1Q16610 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ECM1Q16610 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
ECM1Q16610 CICP24-201ENST00000605464 2705 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms