Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCS1Q01581 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCS1Q01581 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.93□□□□□ -0.02
HMGCS1Q01581 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.93□□□□□ -0.02
HMGCS1Q01581 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCS1Q01581 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.93□□□□□ -0.02
HMGCS1Q01581 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCS1Q01581 AC023908.3-201ENST00000564211 3047 ntBASIC14.92□□□□□ -0.02
HMGCS1Q01581 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.92□□□□□ -0.02
HMGCS1Q01581 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.92□□□□□ -0.02
HMGCS1Q01581 LINC00552-201ENST00000625151 2579 ntBASIC14.92□□□□□ -0.02
HMGCS1Q01581 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGCS1Q01581 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGCS1Q01581 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
HMGCS1Q01581 AP000845.1-201ENST00000581677 2131 ntBASIC14.92□□□□□ -0.02
HMGCS1Q01581 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
HMGCS1Q01581 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HMGCS1Q01581 AL359258.3-201ENST00000622910 2331 ntBASIC14.92□□□□□ -0.02
HMGCS1Q01581 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
HMGCS1Q01581 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGCS1Q01581 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
HMGCS1Q01581 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.92□□□□□ -0.02
HMGCS1Q01581 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.92□□□□□ -0.02
HMGCS1Q01581 AC015922.1-201ENST00000421102 1152 ntBASIC14.92□□□□□ -0.02
HMGCS1Q01581 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.92□□□□□ -0.02
HMGCS1Q01581 CNN2P2-201ENST00000443536 909 ntBASIC14.92□□□□□ -0.02
HMGCS1Q01581 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.92□□□□□ -0.02
HMGCS1Q01581 CNN2P3-201ENST00000450201 906 ntBASIC14.92□□□□□ -0.02
HMGCS1Q01581 AC125807.1-201ENST00000483097 614 ntBASIC14.92□□□□□ -0.02
HMGCS1Q01581 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.92□□□□□ -0.02
HMGCS1Q01581 AC025678.2-201ENST00000562061 970 ntBASIC14.92□□□□□ -0.02
HMGCS1Q01581 AC051619.7-201ENST00000568314 623 ntBASIC14.92□□□□□ -0.02
HMGCS1Q01581 AL136317.3-201ENST00000618497 906 ntBASIC14.92□□□□□ -0.02
HMGCS1Q01581 AC073592.8-201ENST00000624126 511 ntBASIC14.92□□□□□ -0.02
HMGCS1Q01581 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.92□□□□□ -0.02
HMGCS1Q01581 AL109936.8-201ENST00000641772 604 ntBASIC14.92□□□□□ -0.02
HMGCS1Q01581 WASH3P-207ENST00000560956 1394 ntBASIC14.92□□□□□ -0.02
HMGCS1Q01581 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGCS1Q01581 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGCS1Q01581 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.92□□□□□ -0.02
HMGCS1Q01581 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
HMGCS1Q01581 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.92□□□□□ -0.02
HMGCS1Q01581 ACE3P-201ENST00000423435 1973 ntBASIC14.92□□□□□ -0.02
HMGCS1Q01581 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGCS1Q01581 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
HMGCS1Q01581 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
HMGCS1Q01581 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGCS1Q01581 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGCS1Q01581 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HMGCS1Q01581 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HMGCS1Q01581 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.92□□□□□ -0.02
HMGCS1Q01581 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGCS1Q01581 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGCS1Q01581 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HMGCS1Q01581 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.92□□□□□ -0.02
HMGCS1Q01581 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.92□□□□□ -0.02
HMGCS1Q01581 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
HMGCS1Q01581 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGCS1Q01581 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCS1Q01581 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCS1Q01581 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
HMGCS1Q01581 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
HMGCS1Q01581 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCS1Q01581 REXO1L2P-201ENST00000425429 2069 ntBASIC14.91□□□□□ -0.02
HMGCS1Q01581 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.91□□□□□ -0.02
HMGCS1Q01581 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCS1Q01581 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
HMGCS1Q01581 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
HMGCS1Q01581 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCS1Q01581 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.91□□□□□ -0.02
HMGCS1Q01581 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCS1Q01581 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.91□□□□□ -0.02
HMGCS1Q01581 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCS1Q01581 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCS1Q01581 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.91□□□□□ -0.02
HMGCS1Q01581 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCS1Q01581 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCS1Q01581 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCS1Q01581 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCS1Q01581 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCS1Q01581 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCS1Q01581 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCS1Q01581 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
HMGCS1Q01581 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.91□□□□□ -0.02
HMGCS1Q01581 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.91□□□□□ -0.02
HMGCS1Q01581 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.91□□□□□ -0.02
HMGCS1Q01581 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.91□□□□□ -0.02
HMGCS1Q01581 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.91□□□□□ -0.02
HMGCS1Q01581 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
HMGCS1Q01581 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
HMGCS1Q01581 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.91□□□□□ -0.02
HMGCS1Q01581 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.91□□□□□ -0.02
HMGCS1Q01581 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCS1Q01581 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCS1Q01581 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCS1Q01581 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCS1Q01581 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCS1Q01581 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
HMGCS1Q01581 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCS1Q01581 SNX18-202ENST00000343017 3140 ntBASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms