Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.69□□□□□ -0.06
SKP1P63208 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SKP1P63208 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SKP1P63208 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SKP1P63208 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SKP1P63208 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SKP1P63208 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SKP1P63208 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SKP1P63208 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SKP1P63208 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.69□□□□□ -0.06
SKP1P63208 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.69□□□□□ -0.06
SKP1P63208 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.69□□□□□ -0.06
SKP1P63208 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SKP1P63208 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SKP1P63208 OR2I1P-210ENST00000642037 4691 ntBASIC14.69□□□□□ -0.06
SKP1P63208 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SKP1P63208 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SKP1P63208 AC092850.2-201ENST00000623821 2697 ntBASIC14.69□□□□□ -0.06
SKP1P63208 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SKP1P63208 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.68□□□□□ -0.06
SKP1P63208 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SKP1P63208 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SKP1P63208 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SKP1P63208 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SKP1P63208 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SKP1P63208 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SKP1P63208 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SKP1P63208 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SKP1P63208 CU639417.3-201ENST00000624240 1404 ntBASIC14.68□□□□□ -0.06
SKP1P63208 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SKP1P63208 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.68□□□□□ -0.06
SKP1P63208 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SKP1P63208 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.68□□□□□ -0.06
SKP1P63208 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SKP1P63208 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.68□□□□□ -0.06
SKP1P63208 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SKP1P63208 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
SKP1P63208 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SKP1P63208 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
SKP1P63208 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SKP1P63208 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SKP1P63208 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SKP1P63208 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SKP1P63208 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SKP1P63208 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.68□□□□□ -0.06
SKP1P63208 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SKP1P63208 RN7SL692P-201ENST00000464677 288 ntBASIC14.68□□□□□ -0.06
SKP1P63208 ELK1P1-201ENST00000485699 580 ntBASIC14.68□□□□□ -0.06
SKP1P63208 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.68□□□□□ -0.06
SKP1P63208 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SKP1P63208 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SKP1P63208 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.68□□□□□ -0.06
SKP1P63208 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.68□□□□□ -0.06
SKP1P63208 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.68□□□□□ -0.06
SKP1P63208 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.68□□□□□ -0.06
SKP1P63208 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.68□□□□□ -0.06
SKP1P63208 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SKP1P63208 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.68□□□□□ -0.06
SKP1P63208 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SKP1P63208 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.68□□□□□ -0.06
SKP1P63208 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SKP1P63208 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.68□□□□□ -0.06
SKP1P63208 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SKP1P63208 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SKP1P63208 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.68□□□□□ -0.06
SKP1P63208 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SKP1P63208 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SKP1P63208 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.67□□□□□ -0.06
SKP1P63208 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SKP1P63208 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SKP1P63208 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
SKP1P63208 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SKP1P63208 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.67□□□□□ -0.06
SKP1P63208 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SKP1P63208 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SKP1P63208 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
SKP1P63208 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SKP1P63208 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SKP1P63208 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SKP1P63208 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.67□□□□□ -0.06
SKP1P63208 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.67□□□□□ -0.06
SKP1P63208 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SKP1P63208 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.67□□□□□ -0.06
SKP1P63208 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.67□□□□□ -0.06
SKP1P63208 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.67□□□□□ -0.06
SKP1P63208 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SKP1P63208 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.67□□□□□ -0.06
SKP1P63208 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.67□□□□□ -0.06
SKP1P63208 RN7SL752P-201ENST00000463779 287 ntBASIC14.67□□□□□ -0.06
SKP1P63208 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.67□□□□□ -0.06
SKP1P63208 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.67□□□□□ -0.06
SKP1P63208 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.67□□□□□ -0.06
SKP1P63208 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.67□□□□□ -0.06
SKP1P63208 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.67□□□□□ -0.06
SKP1P63208 AC107373.2-201ENST00000607735 490 ntBASIC14.67□□□□□ -0.06
SKP1P63208 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SKP1P63208 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SKP1P63208 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.67□□□□□ -0.06
SKP1P63208 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SKP1P63208 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms