Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH4P55283 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDH4P55283 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CDH4P55283 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH4P55283 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDH4P55283 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH4P55283 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH4P55283 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CDH4P55283 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDH4P55283 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.73■□□□□ 0.11
CDH4P55283 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDH4P55283 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDH4P55283 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDH4P55283 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDH4P55283 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
CDH4P55283 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDH4P55283 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.72■□□□□ 0.11
CDH4P55283 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH4P55283 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH4P55283 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH4P55283 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH4P55283 AC012508.2-201ENST00000567613 1472 ntBASIC15.72■□□□□ 0.11
CDH4P55283 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CDH4P55283 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CDH4P55283 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH4P55283 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH4P55283 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDH4P55283 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CDH4P55283 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CDH4P55283 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH4P55283 KRT8P14-201ENST00000414254 1442 ntBASIC15.72■□□□□ 0.11
CDH4P55283 BCRP2-202ENST00000447763 634 ntBASIC15.72■□□□□ 0.11
CDH4P55283 GPR53P-205ENST00000457298 1084 ntBASIC15.72■□□□□ 0.11
CDH4P55283 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH4P55283 BCRP6-201ENST00000510112 632 ntBASIC15.72■□□□□ 0.11
CDH4P55283 BCRP7-201ENST00000511549 544 ntBASIC15.72■□□□□ 0.11
CDH4P55283 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDH4P55283 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.72■□□□□ 0.11
CDH4P55283 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH4P55283 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH4P55283 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH4P55283 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
CDH4P55283 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH4P55283 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH4P55283 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH4P55283 AC023024.2-201ENST00000623561 1993 ntBASIC15.72■□□□□ 0.11
CDH4P55283 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH4P55283 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH4P55283 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH4P55283 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
CDH4P55283 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH4P55283 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDH4P55283 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH4P55283 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH4P55283 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.72■□□□□ 0.11
CDH4P55283 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDH4P55283 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDH4P55283 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDH4P55283 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.71■□□□□ 0.11
CDH4P55283 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDH4P55283 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH4P55283 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
CDH4P55283 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH4P55283 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CDH4P55283 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH4P55283 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDH4P55283 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH4P55283 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH4P55283 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.71■□□□□ 0.11
CDH4P55283 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDH4P55283 REXO1L4P-201ENST00000605109 1937 ntBASIC15.71■□□□□ 0.11
CDH4P55283 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDH4P55283 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH4P55283 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDH4P55283 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDH4P55283 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
CDH4P55283 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CDH4P55283 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CDH4P55283 AC092933.1-201ENST00000393644 945 ntBASIC15.71■□□□□ 0.11
CDH4P55283 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.71■□□□□ 0.11
CDH4P55283 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.71■□□□□ 0.11
CDH4P55283 AC112492.5-201ENST00000421897 457 ntBASIC15.71■□□□□ 0.11
CDH4P55283 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.71■□□□□ 0.11
CDH4P55283 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.71■□□□□ 0.11
CDH4P55283 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.71■□□□□ 0.11
CDH4P55283 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.71■□□□□ 0.11
CDH4P55283 RAB43P1-201ENST00000561790 589 ntBASIC15.71■□□□□ 0.11
CDH4P55283 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.71■□□□□ 0.11
CDH4P55283 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.71■□□□□ 0.11
CDH4P55283 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDH4P55283 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.71■□□□□ 0.11
CDH4P55283 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDH4P55283 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.71■□□□□ 0.11
CDH4P55283 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDH4P55283 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.71■□□□□ 0.11
CDH4P55283 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CDH4P55283 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDH4P55283 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDH4P55283 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
CDH4P55283 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms