Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.85□□□□□ -0.03
EPHA4P54764 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
EPHA4P54764 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
EPHA4P54764 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
EPHA4P54764 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.85□□□□□ -0.03
EPHA4P54764 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.85□□□□□ -0.03
EPHA4P54764 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.85□□□□□ -0.03
EPHA4P54764 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.85□□□□□ -0.03
EPHA4P54764 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.85□□□□□ -0.03
EPHA4P54764 AL583810.1-201ENST00000553344 1045 ntBASIC14.85□□□□□ -0.03
EPHA4P54764 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.85□□□□□ -0.03
EPHA4P54764 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
EPHA4P54764 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.85□□□□□ -0.03
EPHA4P54764 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
EPHA4P54764 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
EPHA4P54764 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.85□□□□□ -0.03
EPHA4P54764 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
EPHA4P54764 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.85□□□□□ -0.03
EPHA4P54764 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
EPHA4P54764 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
EPHA4P54764 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
EPHA4P54764 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
EPHA4P54764 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.85□□□□□ -0.03
EPHA4P54764 AC007787.1-201ENST00000588095 1583 ntBASIC14.85□□□□□ -0.03
EPHA4P54764 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
EPHA4P54764 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.85□□□□□ -0.03
EPHA4P54764 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
EPHA4P54764 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA4P54764 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.84□□□□□ -0.03
EPHA4P54764 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA4P54764 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.84□□□□□ -0.03
EPHA4P54764 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA4P54764 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
EPHA4P54764 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA4P54764 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA4P54764 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.84□□□□□ -0.03
EPHA4P54764 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
EPHA4P54764 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.84□□□□□ -0.03
EPHA4P54764 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA4P54764 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA4P54764 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA4P54764 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
EPHA4P54764 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA4P54764 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA4P54764 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.84□□□□□ -0.03
EPHA4P54764 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA4P54764 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA4P54764 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
EPHA4P54764 AC010491.1-201ENST00000563101 2797 ntBASIC14.84□□□□□ -0.03
EPHA4P54764 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.84□□□□□ -0.03
EPHA4P54764 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA4P54764 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA4P54764 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA4P54764 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA4P54764 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
EPHA4P54764 AL139094.1-201ENST00000405549 1188 ntBASIC14.84□□□□□ -0.03
EPHA4P54764 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.84□□□□□ -0.03
EPHA4P54764 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.84□□□□□ -0.03
EPHA4P54764 AL355994.2-201ENST00000447882 704 ntBASIC14.84□□□□□ -0.03
EPHA4P54764 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA4P54764 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA4P54764 AC092658.1-201ENST00000505836 891 ntBASIC14.84□□□□□ -0.03
EPHA4P54764 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.84□□□□□ -0.03
EPHA4P54764 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC14.84□□□□□ -0.03
EPHA4P54764 AC023310.1-201ENST00000554836 735 ntBASIC14.84□□□□□ -0.03
EPHA4P54764 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.84□□□□□ -0.03
EPHA4P54764 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.84□□□□□ -0.03
EPHA4P54764 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.84□□□□□ -0.03
EPHA4P54764 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA4P54764 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.84□□□□□ -0.03
EPHA4P54764 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.84□□□□□ -0.03
EPHA4P54764 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.84□□□□□ -0.03
EPHA4P54764 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.84□□□□□ -0.03
EPHA4P54764 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.84□□□□□ -0.03
EPHA4P54764 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA4P54764 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA4P54764 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.84□□□□□ -0.03
EPHA4P54764 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
EPHA4P54764 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.84□□□□□ -0.03
EPHA4P54764 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA4P54764 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA4P54764 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA4P54764 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA4P54764 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.84□□□□□ -0.03
EPHA4P54764 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
EPHA4P54764 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA4P54764 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.84□□□□□ -0.03
EPHA4P54764 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EPHA4P54764 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
EPHA4P54764 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.83□□□□□ -0.03
EPHA4P54764 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.83□□□□□ -0.03
EPHA4P54764 AC092384.3-202ENST00000564646 2873 ntBASIC14.83□□□□□ -0.03
EPHA4P54764 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
EPHA4P54764 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.83□□□□□ -0.03
EPHA4P54764 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.83□□□□□ -0.03
EPHA4P54764 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
EPHA4P54764 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
EPHA4P54764 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
EPHA4P54764 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
EPHA4P54764 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms