Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.08□□□□□ -0.16
HMGA2P52926 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.08□□□□□ -0.16
HMGA2P52926 PGAM5P1-201ENST00000518923 814 ntBASIC14.08□□□□□ -0.16
HMGA2P52926 AC093520.2-201ENST00000561830 333 ntBASIC14.08□□□□□ -0.16
HMGA2P52926 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.08□□□□□ -0.16
HMGA2P52926 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
HMGA2P52926 AL513210.1-201ENST00000629608 234 ntBASIC14.08□□□□□ -0.16
HMGA2P52926 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGA2P52926 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
HMGA2P52926 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGA2P52926 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
HMGA2P52926 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
HMGA2P52926 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGA2P52926 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGA2P52926 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
HMGA2P52926 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
HMGA2P52926 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGA2P52926 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGA2P52926 AC104581.4-201ENST00000623126 3052 ntBASIC14.08□□□□□ -0.16
HMGA2P52926 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
HMGA2P52926 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
HMGA2P52926 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
HMGA2P52926 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.07□□□□□ -0.16
HMGA2P52926 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
HMGA2P52926 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.07□□□□□ -0.16
HMGA2P52926 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMGA2P52926 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HMGA2P52926 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.07□□□□□ -0.16
HMGA2P52926 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.07□□□□□ -0.16
HMGA2P52926 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMGA2P52926 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.07□□□□□ -0.16
HMGA2P52926 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
HMGA2P52926 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMGA2P52926 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HMGA2P52926 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMGA2P52926 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.07□□□□□ -0.16
HMGA2P52926 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HMGA2P52926 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMGA2P52926 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
HMGA2P52926 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HMGA2P52926 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HMGA2P52926 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMGA2P52926 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMGA2P52926 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.07□□□□□ -0.16
HMGA2P52926 KRT18P32-201ENST00000424695 1287 ntBASIC14.07□□□□□ -0.16
HMGA2P52926 SPDYE14P-201ENST00000442619 822 ntBASIC14.07□□□□□ -0.16
HMGA2P52926 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.07□□□□□ -0.16
HMGA2P52926 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.07□□□□□ -0.16
HMGA2P52926 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.07□□□□□ -0.16
HMGA2P52926 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMGA2P52926 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.07□□□□□ -0.16
HMGA2P52926 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.07□□□□□ -0.16
HMGA2P52926 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.07□□□□□ -0.16
HMGA2P52926 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.07□□□□□ -0.16
HMGA2P52926 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMGA2P52926 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMGA2P52926 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMGA2P52926 AC120114.3-201ENST00000611923 658 ntBASIC14.07□□□□□ -0.16
HMGA2P52926 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HMGA2P52926 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.07□□□□□ -0.16
HMGA2P52926 AF228730.6-201ENST00000641497 218 ntBASIC14.07□□□□□ -0.16
HMGA2P52926 AL033527.5-202ENST00000641632 1098 ntBASIC14.07□□□□□ -0.16
HMGA2P52926 AC084121.3-201ENST00000641716 218 ntBASIC14.07□□□□□ -0.16
HMGA2P52926 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.07□□□□□ -0.16
HMGA2P52926 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMGA2P52926 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.07□□□□□ -0.16
HMGA2P52926 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
HMGA2P52926 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMGA2P52926 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.07□□□□□ -0.16
HMGA2P52926 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.07□□□□□ -0.16
HMGA2P52926 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
HMGA2P52926 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
HMGA2P52926 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.07□□□□□ -0.16
HMGA2P52926 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
HMGA2P52926 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HMGA2P52926 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.06□□□□□ -0.16
HMGA2P52926 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMGA2P52926 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.06□□□□□ -0.16
HMGA2P52926 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMGA2P52926 AL121723.1-201ENST00000445194 1519 ntBASIC14.06□□□□□ -0.16
HMGA2P52926 PCDHA3-202ENST00000532566 4594 ntBASIC14.06□□□□□ -0.16
HMGA2P52926 AC068587.6-202ENST00000641839 5619 ntBASIC14.06□□□□□ -0.16
HMGA2P52926 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.06□□□□□ -0.16
HMGA2P52926 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMGA2P52926 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMGA2P52926 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.06□□□□□ -0.16
HMGA2P52926 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMGA2P52926 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMGA2P52926 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMGA2P52926 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
HMGA2P52926 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
HMGA2P52926 AL627223.1-201ENST00000416693 442 ntBASIC14.06□□□□□ -0.16
HMGA2P52926 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.06□□□□□ -0.16
HMGA2P52926 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.06□□□□□ -0.16
HMGA2P52926 KRT18P43-201ENST00000469825 1281 ntBASIC14.06□□□□□ -0.16
HMGA2P52926 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.06□□□□□ -0.16
HMGA2P52926 AC026150.2-201ENST00000564693 1156 ntBASIC14.06□□□□□ -0.16
HMGA2P52926 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.06□□□□□ -0.16
HMGA2P52926 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.06□□□□□ -0.16
HMGA2P52926 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms