Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCR9P51686 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.66□□□□□ -0.22
CCR9P51686 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCR9P51686 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.66□□□□□ -0.22
CCR9P51686 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCR9P51686 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.66□□□□□ -0.22
CCR9P51686 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CCR9P51686 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCR9P51686 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCR9P51686 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCR9P51686 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCR9P51686 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCR9P51686 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CCR9P51686 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.66□□□□□ -0.22
CCR9P51686 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCR9P51686 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCR9P51686 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCR9P51686 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.66□□□□□ -0.22
CCR9P51686 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCR9P51686 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CCR9P51686 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCR9P51686 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCR9P51686 ACE3P-201ENST00000423435 1973 ntBASIC13.65□□□□□ -0.22
CCR9P51686 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CCR9P51686 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.65□□□□□ -0.22
CCR9P51686 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CCR9P51686 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
CCR9P51686 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCR9P51686 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.65□□□□□ -0.22
CCR9P51686 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCR9P51686 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CCR9P51686 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCR9P51686 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
CCR9P51686 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.65□□□□□ -0.22
CCR9P51686 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCR9P51686 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCR9P51686 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCR9P51686 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCR9P51686 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCR9P51686 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCR9P51686 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCR9P51686 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCR9P51686 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
CCR9P51686 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCR9P51686 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.65□□□□□ -0.22
CCR9P51686 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.65□□□□□ -0.22
CCR9P51686 HIST3H2BA-201ENST00000436555 524 ntBASIC13.65□□□□□ -0.22
CCR9P51686 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCR9P51686 TIMM8BP1-201ENST00000452384 211 ntBASIC13.65□□□□□ -0.22
CCR9P51686 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCR9P51686 AC105021.1-202ENST00000570572 669 ntBASIC13.65□□□□□ -0.22
CCR9P51686 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCR9P51686 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.65□□□□□ -0.22
CCR9P51686 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCR9P51686 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCR9P51686 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
CCR9P51686 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.65□□□□□ -0.22
CCR9P51686 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCR9P51686 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCR9P51686 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCR9P51686 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.65□□□□□ -0.22
CCR9P51686 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.65□□□□□ -0.22
CCR9P51686 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCR9P51686 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCR9P51686 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
CCR9P51686 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
CCR9P51686 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCR9P51686 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCR9P51686 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.64□□□□□ -0.23
CCR9P51686 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CCR9P51686 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
CCR9P51686 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCR9P51686 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.64□□□□□ -0.23
CCR9P51686 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.64□□□□□ -0.23
CCR9P51686 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCR9P51686 AC015656.1-201ENST00000624209 3578 ntBASIC13.64□□□□□ -0.23
CCR9P51686 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCR9P51686 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.64□□□□□ -0.23
CCR9P51686 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.64□□□□□ -0.23
CCR9P51686 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.64□□□□□ -0.23
CCR9P51686 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCR9P51686 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.64□□□□□ -0.23
CCR9P51686 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.64□□□□□ -0.23
CCR9P51686 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCR9P51686 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCR9P51686 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCR9P51686 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CCR9P51686 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCR9P51686 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCR9P51686 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.64□□□□□ -0.23
CCR9P51686 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCR9P51686 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
CCR9P51686 YBX2P1-201ENST00000394192 760 ntBASIC13.64□□□□□ -0.23
CCR9P51686 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.64□□□□□ -0.23
CCR9P51686 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.64□□□□□ -0.23
CCR9P51686 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.64□□□□□ -0.23
CCR9P51686 MKNK2P1-201ENST00000437526 628 ntBASIC13.64□□□□□ -0.23
CCR9P51686 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCR9P51686 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCR9P51686 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms