Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC9A3P48764 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.26□□□□□ -0.13
SLC9A3P48764 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC9A3P48764 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SLC9A3P48764 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC9A3P48764 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC9A3P48764 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC9A3P48764 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC9A3P48764 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SLC9A3P48764 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SLC9A3P48764 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC9A3P48764 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.26□□□□□ -0.13
SLC9A3P48764 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SLC9A3P48764 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC9A3P48764 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC9A3P48764 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC9A3P48764 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC9A3P48764 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC9A3P48764 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC9A3P48764 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.25□□□□□ -0.13
SLC9A3P48764 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC9A3P48764 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.25□□□□□ -0.13
SLC9A3P48764 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC9A3P48764 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
SLC9A3P48764 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.25□□□□□ -0.13
SLC9A3P48764 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SLC9A3P48764 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SLC9A3P48764 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC9A3P48764 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC9A3P48764 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SLC9A3P48764 AZGP1P1-201ENST00000411909 902 ntBASIC14.25□□□□□ -0.13
SLC9A3P48764 SPDYE17-201ENST00000412399 783 ntBASIC14.25□□□□□ -0.13
SLC9A3P48764 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.25□□□□□ -0.13
SLC9A3P48764 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.25□□□□□ -0.13
SLC9A3P48764 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC9A3P48764 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.25□□□□□ -0.13
SLC9A3P48764 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.25□□□□□ -0.13
SLC9A3P48764 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.25□□□□□ -0.13
SLC9A3P48764 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SLC9A3P48764 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
SLC9A3P48764 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.25□□□□□ -0.13
SLC9A3P48764 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SLC9A3P48764 AL513210.1-201ENST00000629608 234 ntBASIC14.25□□□□□ -0.13
SLC9A3P48764 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.25□□□□□ -0.13
SLC9A3P48764 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC9A3P48764 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC9A3P48764 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC9A3P48764 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SLC9A3P48764 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC9A3P48764 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC9A3P48764 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
SLC9A3P48764 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.25□□□□□ -0.13
SLC9A3P48764 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SLC9A3P48764 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC9A3P48764 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC9A3P48764 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC9A3P48764 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SLC9A3P48764 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.25□□□□□ -0.13
SLC9A3P48764 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SLC9A3P48764 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SLC9A3P48764 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SLC9A3P48764 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.24□□□□□ -0.13
SLC9A3P48764 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC9A3P48764 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SLC9A3P48764 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SLC9A3P48764 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLC9A3P48764 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SLC9A3P48764 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
SLC9A3P48764 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC9A3P48764 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLC9A3P48764 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC9A3P48764 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC9A3P48764 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
SLC9A3P48764 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC9A3P48764 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLC9A3P48764 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SLC9A3P48764 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLC9A3P48764 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.24□□□□□ -0.13
SLC9A3P48764 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.24□□□□□ -0.13
SLC9A3P48764 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLC9A3P48764 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.24□□□□□ -0.13
SLC9A3P48764 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.24□□□□□ -0.13
SLC9A3P48764 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.24□□□□□ -0.13
SLC9A3P48764 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SLC9A3P48764 AL607033.1-201ENST00000623900 1599 ntBASIC14.24□□□□□ -0.13
SLC9A3P48764 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
SLC9A3P48764 FGD5P1-202ENST00000614866 2498 ntBASIC14.24□□□□□ -0.13
SLC9A3P48764 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC9A3P48764 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SLC9A3P48764 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SLC9A3P48764 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.24□□□□□ -0.13
SLC9A3P48764 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC9A3P48764 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC9A3P48764 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.24□□□□□ -0.13
SLC9A3P48764 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SLC9A3P48764 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.24□□□□□ -0.13
SLC9A3P48764 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC9A3P48764 AC148477.4-201ENST00000613430 1793 ntBASIC14.24□□□□□ -0.13
SLC9A3P48764 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC9A3P48764 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms