Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 REXO1L5P-201ENST00000622260 2098 ntBASIC16.34■□□□□ 0.21
BRCC3P46736 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.34■□□□□ 0.21
BRCC3P46736 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.34■□□□□ 0.21
BRCC3P46736 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.34■□□□□ 0.21
BRCC3P46736 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BRCC3P46736 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
BRCC3P46736 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
BRCC3P46736 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
BRCC3P46736 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
BRCC3P46736 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
BRCC3P46736 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
BRCC3P46736 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
BRCC3P46736 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
BRCC3P46736 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.33■□□□□ 0.21
BRCC3P46736 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
BRCC3P46736 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
BRCC3P46736 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.33■□□□□ 0.21
BRCC3P46736 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.33■□□□□ 0.21
BRCC3P46736 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BRCC3P46736 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BRCC3P46736 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BRCC3P46736 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BRCC3P46736 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
BRCC3P46736 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
BRCC3P46736 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BRCC3P46736 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
BRCC3P46736 TPM3P8-201ENST00000330554 643 ntBASIC16.33■□□□□ 0.2
BRCC3P46736 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.33■□□□□ 0.2
BRCC3P46736 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
BRCC3P46736 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BRCC3P46736 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
BRCC3P46736 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.33■□□□□ 0.2
BRCC3P46736 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.33■□□□□ 0.2
BRCC3P46736 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.33■□□□□ 0.2
BRCC3P46736 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.33■□□□□ 0.2
BRCC3P46736 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.33■□□□□ 0.2
BRCC3P46736 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.33■□□□□ 0.2
BRCC3P46736 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.33■□□□□ 0.2
BRCC3P46736 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.33■□□□□ 0.2
BRCC3P46736 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
BRCC3P46736 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
BRCC3P46736 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.33■□□□□ 0.2
BRCC3P46736 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.33■□□□□ 0.2
BRCC3P46736 RN7SL48P-201ENST00000579283 293 ntBASIC16.33■□□□□ 0.2
BRCC3P46736 MIR4741-201ENST00000579822 90 ntBASIC16.33■□□□□ 0.2
BRCC3P46736 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.33■□□□□ 0.2
BRCC3P46736 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
BRCC3P46736 GPR182-203ENST00000622922 591 ntBASIC16.33■□□□□ 0.2
BRCC3P46736 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
BRCC3P46736 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.33■□□□□ 0.2
BRCC3P46736 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
BRCC3P46736 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
BRCC3P46736 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
BRCC3P46736 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
BRCC3P46736 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.33■□□□□ 0.2
BRCC3P46736 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BRCC3P46736 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
BRCC3P46736 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
BRCC3P46736 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.33■□□□□ 0.2
BRCC3P46736 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
BRCC3P46736 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
BRCC3P46736 AL359258.3-201ENST00000622910 2331 ntBASIC16.33■□□□□ 0.2
BRCC3P46736 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.33■□□□□ 0.2
BRCC3P46736 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.33■□□□□ 0.2
BRCC3P46736 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
BRCC3P46736 AC046158.3-201ENST00000624947 2558 ntBASIC16.33■□□□□ 0.2
BRCC3P46736 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BRCC3P46736 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BRCC3P46736 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
BRCC3P46736 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
BRCC3P46736 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BRCC3P46736 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
BRCC3P46736 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BRCC3P46736 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BRCC3P46736 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BRCC3P46736 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BRCC3P46736 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BRCC3P46736 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BRCC3P46736 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
BRCC3P46736 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BRCC3P46736 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BRCC3P46736 MIR326-201ENST00000362220 95 ntBASIC16.32■□□□□ 0.2
BRCC3P46736 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BRCC3P46736 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.32■□□□□ 0.2
BRCC3P46736 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.32■□□□□ 0.2
BRCC3P46736 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
BRCC3P46736 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.32■□□□□ 0.2
BRCC3P46736 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BRCC3P46736 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
BRCC3P46736 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.32■□□□□ 0.2
BRCC3P46736 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
BRCC3P46736 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BRCC3P46736 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.32■□□□□ 0.2
BRCC3P46736 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.32■□□□□ 0.2
BRCC3P46736 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
BRCC3P46736 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
BRCC3P46736 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
BRCC3P46736 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.32■□□□□ 0.2
BRCC3P46736 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.32■□□□□ 0.2
BRCC3P46736 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms