Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HOXC12P31275 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
HOXC12P31275 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HOXC12P31275 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.77□□□□□ -0.21
HOXC12P31275 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HOXC12P31275 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HOXC12P31275 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
HOXC12P31275 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
HOXC12P31275 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HOXC12P31275 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HOXC12P31275 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
HOXC12P31275 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.76□□□□□ -0.21
HOXC12P31275 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HOXC12P31275 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
HOXC12P31275 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HOXC12P31275 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HOXC12P31275 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.76□□□□□ -0.21
HOXC12P31275 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HOXC12P31275 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.76□□□□□ -0.21
HOXC12P31275 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HOXC12P31275 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HOXC12P31275 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HOXC12P31275 AC010491.1-201ENST00000563101 2797 ntBASIC13.76□□□□□ -0.21
HOXC12P31275 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
HOXC12P31275 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HOXC12P31275 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HOXC12P31275 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.76□□□□□ -0.21
HOXC12P31275 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.76□□□□□ -0.21
HOXC12P31275 TMEM14DP-201ENST00000422205 345 ntBASIC13.76□□□□□ -0.21
HOXC12P31275 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.76□□□□□ -0.21
HOXC12P31275 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HOXC12P31275 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.76□□□□□ -0.21
HOXC12P31275 AC123567.1-201ENST00000548294 1261 ntBASIC13.76□□□□□ -0.21
HOXC12P31275 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.76□□□□□ -0.21
HOXC12P31275 AC023310.3-201ENST00000557027 670 ntBASIC13.76□□□□□ -0.21
HOXC12P31275 AC100756.1-201ENST00000562736 682 ntBASIC13.76□□□□□ -0.21
HOXC12P31275 AC138749.3-201ENST00000567691 622 ntBASIC13.76□□□□□ -0.21
HOXC12P31275 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
HOXC12P31275 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
HOXC12P31275 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
HOXC12P31275 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.76□□□□□ -0.21
HOXC12P31275 AC116165.1-201ENST00000611806 668 ntBASIC13.76□□□□□ -0.21
HOXC12P31275 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
HOXC12P31275 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
HOXC12P31275 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HOXC12P31275 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.76□□□□□ -0.21
HOXC12P31275 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HOXC12P31275 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
HOXC12P31275 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HOXC12P31275 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
HOXC12P31275 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.76□□□□□ -0.21
HOXC12P31275 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HOXC12P31275 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HOXC12P31275 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HOXC12P31275 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
HOXC12P31275 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HOXC12P31275 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
HOXC12P31275 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HOXC12P31275 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HOXC12P31275 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HOXC12P31275 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.75□□□□□ -0.21
HOXC12P31275 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HOXC12P31275 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.75□□□□□ -0.21
HOXC12P31275 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.75□□□□□ -0.21
HOXC12P31275 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HOXC12P31275 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HOXC12P31275 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HOXC12P31275 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HOXC12P31275 AC026691.1-201ENST00000602502 2017 ntBASIC13.75□□□□□ -0.21
HOXC12P31275 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HOXC12P31275 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
HOXC12P31275 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
HOXC12P31275 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.75□□□□□ -0.21
HOXC12P31275 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
HOXC12P31275 BOLA2P3-201ENST00000404566 256 ntBASIC13.75□□□□□ -0.21
HOXC12P31275 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.75□□□□□ -0.21
HOXC12P31275 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.75□□□□□ -0.21
HOXC12P31275 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.75□□□□□ -0.21
HOXC12P31275 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.75□□□□□ -0.21
HOXC12P31275 SNX29P1-201ENST00000548357 1007 ntBASIC13.75□□□□□ -0.21
HOXC12P31275 MIR4538-201ENST00000581377 78 ntBASIC13.75□□□□□ -0.21
HOXC12P31275 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
HOXC12P31275 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
HOXC12P31275 AC018695.7-201ENST00000624587 2492 ntBASIC13.75□□□□□ -0.21
HOXC12P31275 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HOXC12P31275 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.75□□□□□ -0.21
HOXC12P31275 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HOXC12P31275 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.75□□□□□ -0.21
HOXC12P31275 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HOXC12P31275 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.75□□□□□ -0.21
HOXC12P31275 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.75□□□□□ -0.21
HOXC12P31275 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.75□□□□□ -0.21
HOXC12P31275 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
HOXC12P31275 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HOXC12P31275 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HOXC12P31275 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HOXC12P31275 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HOXC12P31275 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.75□□□□□ -0.21
HOXC12P31275 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HOXC12P31275 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms