Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PDGFRAP16234 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PDGFRAP16234 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.22■□□□□ 0.19
PDGFRAP16234 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PDGFRAP16234 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
PDGFRAP16234 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDGFRAP16234 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
PDGFRAP16234 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.21■□□□□ 0.19
PDGFRAP16234 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDGFRAP16234 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDGFRAP16234 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDGFRAP16234 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDGFRAP16234 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.21■□□□□ 0.19
PDGFRAP16234 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDGFRAP16234 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDGFRAP16234 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDGFRAP16234 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDGFRAP16234 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PDGFRAP16234 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDGFRAP16234 RN7SL399P-201ENST00000471648 279 ntBASIC16.21■□□□□ 0.19
PDGFRAP16234 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.21■□□□□ 0.19
PDGFRAP16234 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PDGFRAP16234 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDGFRAP16234 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.21■□□□□ 0.19
PDGFRAP16234 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PDGFRAP16234 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PDGFRAP16234 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.21■□□□□ 0.19
PDGFRAP16234 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PDGFRAP16234 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
PDGFRAP16234 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PDGFRAP16234 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
PDGFRAP16234 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
PDGFRAP16234 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFRAP16234 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFRAP16234 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFRAP16234 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.2■□□□□ 0.18
PDGFRAP16234 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFRAP16234 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PDGFRAP16234 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFRAP16234 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFRAP16234 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.2■□□□□ 0.18
PDGFRAP16234 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.2■□□□□ 0.18
PDGFRAP16234 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.2■□□□□ 0.18
PDGFRAP16234 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFRAP16234 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFRAP16234 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.2■□□□□ 0.18
PDGFRAP16234 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.2■□□□□ 0.18
PDGFRAP16234 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PDGFRAP16234 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.2■□□□□ 0.18
PDGFRAP16234 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFRAP16234 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFRAP16234 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
PDGFRAP16234 GHSR-202ENST00000427970 912 ntBASIC16.2■□□□□ 0.18
PDGFRAP16234 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.2■□□□□ 0.18
PDGFRAP16234 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PDGFRAP16234 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFRAP16234 FAM86LP-201ENST00000478302 853 ntBASIC16.2■□□□□ 0.18
PDGFRAP16234 AP005018.1-201ENST00000525475 301 ntBASIC16.2■□□□□ 0.18
PDGFRAP16234 AC055876.2-201ENST00000531834 546 ntBASIC16.2■□□□□ 0.18
PDGFRAP16234 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
PDGFRAP16234 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.2■□□□□ 0.18
PDGFRAP16234 AC140912.1-201ENST00000577171 1054 ntBASIC16.2■□□□□ 0.18
PDGFRAP16234 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.2■□□□□ 0.18
PDGFRAP16234 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.2■□□□□ 0.18
PDGFRAP16234 CHCHD2P3-201ENST00000603038 451 ntBASIC16.2■□□□□ 0.18
PDGFRAP16234 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.2■□□□□ 0.18
PDGFRAP16234 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFRAP16234 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PDGFRAP16234 AL645728.2-202ENST00000641679 227 ntBASIC16.2■□□□□ 0.18
PDGFRAP16234 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFRAP16234 SLC7A15P-201ENST00000424028 1363 ntBASIC16.2■□□□□ 0.18
PDGFRAP16234 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
PDGFRAP16234 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFRAP16234 MROH4P-201ENST00000431302 1578 ntBASIC16.2■□□□□ 0.18
PDGFRAP16234 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFRAP16234 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFRAP16234 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFRAP16234 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFRAP16234 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PDGFRAP16234 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.2■□□□□ 0.18
PDGFRAP16234 AGAP7P-201ENST00000582299 2062 ntBASIC16.2■□□□□ 0.18
PDGFRAP16234 AGAP14-201ENST00000624701 2060 ntBASIC16.2■□□□□ 0.18
PDGFRAP16234 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PDGFRAP16234 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PDGFRAP16234 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PDGFRAP16234 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PDGFRAP16234 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFRAP16234 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PDGFRAP16234 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFRAP16234 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFRAP16234 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFRAP16234 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PDGFRAP16234 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFRAP16234 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFRAP16234 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFRAP16234 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFRAP16234 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFRAP16234 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFRAP16234 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PDGFRAP16234 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms