Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC4P09017 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC4P09017 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC4P09017 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC4P09017 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.92□□□□□ -0.02
HOXC4P09017 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC4P09017 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.92□□□□□ -0.02
HOXC4P09017 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC4P09017 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC4P09017 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC4P09017 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC4P09017 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC4P09017 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC4P09017 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC4P09017 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC4P09017 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.92□□□□□ -0.02
HOXC4P09017 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.92□□□□□ -0.02
HOXC4P09017 Z93015.1-201ENST00000451718 390 ntBASIC14.92□□□□□ -0.02
HOXC4P09017 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC4P09017 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.92□□□□□ -0.02
HOXC4P09017 COX5BP1-201ENST00000507622 393 ntBASIC14.92□□□□□ -0.02
HOXC4P09017 FAM86HP-204ENST00000513466 959 ntBASIC14.92□□□□□ -0.02
HOXC4P09017 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.92□□□□□ -0.02
HOXC4P09017 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC4P09017 AC106820.3-201ENST00000561653 397 ntBASIC14.92□□□□□ -0.02
HOXC4P09017 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.92□□□□□ -0.02
HOXC4P09017 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.92□□□□□ -0.02
HOXC4P09017 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.92□□□□□ -0.02
HOXC4P09017 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.92□□□□□ -0.02
HOXC4P09017 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.92□□□□□ -0.02
HOXC4P09017 ZACNP1-201ENST00000612259 710 ntBASIC14.92□□□□□ -0.02
HOXC4P09017 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.92□□□□□ -0.02
HOXC4P09017 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.92□□□□□ -0.02
HOXC4P09017 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
HOXC4P09017 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.92□□□□□ -0.02
HOXC4P09017 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC4P09017 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.92□□□□□ -0.02
HOXC4P09017 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.92□□□□□ -0.02
HOXC4P09017 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC4P09017 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC4P09017 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC4P09017 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.92□□□□□ -0.02
HOXC4P09017 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC4P09017 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC4P09017 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.92□□□□□ -0.02
HOXC4P09017 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
HOXC4P09017 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC4P09017 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.92□□□□□ -0.02
HOXC4P09017 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC4P09017 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC4P09017 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
HOXC4P09017 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC4P09017 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HOXC4P09017 AC015818.8-201ENST00000587907 1519 ntBASIC14.92□□□□□ -0.02
HOXC4P09017 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.92□□□□□ -0.02
HOXC4P09017 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HOXC4P09017 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
HOXC4P09017 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HOXC4P09017 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.91□□□□□ -0.02
HOXC4P09017 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HOXC4P09017 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HOXC4P09017 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HOXC4P09017 SSR4P1-203ENST00000599569 2260 ntBASIC14.91□□□□□ -0.02
HOXC4P09017 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.91□□□□□ -0.02
HOXC4P09017 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
HOXC4P09017 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HOXC4P09017 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HOXC4P09017 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.91□□□□□ -0.02
HOXC4P09017 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HOXC4P09017 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HOXC4P09017 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HOXC4P09017 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HOXC4P09017 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HOXC4P09017 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HOXC4P09017 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HOXC4P09017 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
HOXC4P09017 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HOXC4P09017 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
HOXC4P09017 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.91□□□□□ -0.02
HOXC4P09017 GOLGA2P4-201ENST00000441462 777 ntBASIC14.91□□□□□ -0.02
HOXC4P09017 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.91□□□□□ -0.02
HOXC4P09017 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.91□□□□□ -0.02
HOXC4P09017 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.91□□□□□ -0.02
HOXC4P09017 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HOXC4P09017 RN7SL219P-201ENST00000582872 296 ntBASIC14.91□□□□□ -0.02
HOXC4P09017 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.91□□□□□ -0.02
HOXC4P09017 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HOXC4P09017 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HOXC4P09017 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HOXC4P09017 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HOXC4P09017 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
HOXC4P09017 AL157414.3-201ENST00000624276 1954 ntBASIC14.91□□□□□ -0.02
HOXC4P09017 C18orf15-201ENST00000623680 2534 ntBASIC14.91□□□□□ -0.02
HOXC4P09017 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.9□□□□□ -0.02
HOXC4P09017 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.9□□□□□ -0.02
HOXC4P09017 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.9□□□□□ -0.02
HOXC4P09017 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HOXC4P09017 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HOXC4P09017 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.9□□□□□ -0.02
HOXC4P09017 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms