Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPM3P06753 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TPM3P06753 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPM3P06753 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPM3P06753 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
TPM3P06753 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPM3P06753 RPL5P21-201ENST00000404620 815 ntBASIC17.39■□□□□ 0.37
TPM3P06753 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.39■□□□□ 0.37
TPM3P06753 PHKG1P2-201ENST00000457537 863 ntBASIC17.39■□□□□ 0.37
TPM3P06753 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.39■□□□□ 0.37
TPM3P06753 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.39■□□□□ 0.37
TPM3P06753 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPM3P06753 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.39■□□□□ 0.37
TPM3P06753 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.39■□□□□ 0.37
TPM3P06753 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.39■□□□□ 0.37
TPM3P06753 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.39■□□□□ 0.37
TPM3P06753 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC17.39■□□□□ 0.37
TPM3P06753 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC17.39■□□□□ 0.37
TPM3P06753 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
TPM3P06753 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPM3P06753 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TPM3P06753 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPM3P06753 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TPM3P06753 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TPM3P06753 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TPM3P06753 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.39■□□□□ 0.37
TPM3P06753 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPM3P06753 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC17.39■□□□□ 0.37
TPM3P06753 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPM3P06753 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPM3P06753 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPM3P06753 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TPM3P06753 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TPM3P06753 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TPM3P06753 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPM3P06753 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TPM3P06753 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TPM3P06753 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPM3P06753 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC17.38■□□□□ 0.37
TPM3P06753 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
TPM3P06753 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TPM3P06753 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPM3P06753 AL031284.1-201ENST00000419297 478 ntBASIC17.38■□□□□ 0.37
TPM3P06753 UNC93B7-201ENST00000509439 705 ntBASIC17.38■□□□□ 0.37
TPM3P06753 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.38■□□□□ 0.37
TPM3P06753 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.38■□□□□ 0.37
TPM3P06753 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.38■□□□□ 0.37
TPM3P06753 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.38■□□□□ 0.37
TPM3P06753 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.38■□□□□ 0.37
TPM3P06753 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.38■□□□□ 0.37
TPM3P06753 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
TPM3P06753 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.38■□□□□ 0.37
TPM3P06753 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TPM3P06753 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC17.38■□□□□ 0.37
TPM3P06753 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.38■□□□□ 0.37
TPM3P06753 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPM3P06753 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPM3P06753 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.38■□□□□ 0.37
TPM3P06753 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPM3P06753 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
TPM3P06753 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPM3P06753 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPM3P06753 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.38■□□□□ 0.37
TPM3P06753 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPM3P06753 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TPM3P06753 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TPM3P06753 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPM3P06753 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPM3P06753 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPM3P06753 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPM3P06753 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPM3P06753 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC17.38■□□□□ 0.37
TPM3P06753 KRT8P37-201ENST00000451609 1420 ntBASIC17.38■□□□□ 0.37
TPM3P06753 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.38■□□□□ 0.37
TPM3P06753 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TPM3P06753 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
TPM3P06753 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPM3P06753 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC17.37■□□□□ 0.37
TPM3P06753 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TPM3P06753 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TPM3P06753 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPM3P06753 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TPM3P06753 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPM3P06753 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC17.37■□□□□ 0.37
TPM3P06753 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TPM3P06753 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPM3P06753 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPM3P06753 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.37■□□□□ 0.37
TPM3P06753 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TPM3P06753 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.37■□□□□ 0.37
TPM3P06753 AC079776.4-201ENST00000511039 504 ntBASIC17.37■□□□□ 0.37
TPM3P06753 RNA5SP415-201ENST00000517246 115 ntBASIC17.37■□□□□ 0.37
TPM3P06753 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.37■□□□□ 0.37
TPM3P06753 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.37■□□□□ 0.37
TPM3P06753 AC068137.2-201ENST00000605408 478 ntBASIC17.37■□□□□ 0.37
TPM3P06753 MIR7706-201ENST00000613747 67 ntBASIC17.37■□□□□ 0.37
TPM3P06753 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.37■□□□□ 0.37
TPM3P06753 AC004877.2-201ENST00000623941 599 ntBASIC17.37■□□□□ 0.37
TPM3P06753 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.37■□□□□ 0.37
TPM3P06753 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms