Protein–RNA interactions for Protein: P04179

SOD2, Superoxide dismutase [Mn], mitochondrial, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2P04179 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.09■□□□□ 0.17
SOD2P04179 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SOD2P04179 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.09■□□□□ 0.17
SOD2P04179 MIR3619-201ENST00000579667 83 ntBASIC16.09■□□□□ 0.17
SOD2P04179 AL023803.2-201ENST00000620080 638 ntBASIC16.09■□□□□ 0.17
SOD2P04179 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC16.09■□□□□ 0.17
SOD2P04179 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC16.09■□□□□ 0.17
SOD2P04179 AC138627.1-207ENST00000641560 1006 ntBASIC16.09■□□□□ 0.17
SOD2P04179 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SOD2P04179 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SOD2P04179 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SOD2P04179 FKBP4P6-201ENST00000457486 1332 ntBASIC16.09■□□□□ 0.17
SOD2P04179 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SOD2P04179 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SOD2P04179 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SOD2P04179 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SOD2P04179 AP000593.2-201ENST00000542775 1433 ntBASIC16.09■□□□□ 0.17
SOD2P04179 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SOD2P04179 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SOD2P04179 AL513523.2-202ENST00000427283 2040 ntBASIC16.09■□□□□ 0.17
SOD2P04179 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC16.09■□□□□ 0.17
SOD2P04179 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.09■□□□□ 0.17
SOD2P04179 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SOD2P04179 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SOD2P04179 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SOD2P04179 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SOD2P04179 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.17
SOD2P04179 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SOD2P04179 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SOD2P04179 AL139384.1-201ENST00000612143 3047 ntBASIC16.08■□□□□ 0.17
SOD2P04179 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SOD2P04179 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SOD2P04179 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SOD2P04179 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.08■□□□□ 0.17
SOD2P04179 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SOD2P04179 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.08■□□□□ 0.17
SOD2P04179 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SOD2P04179 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SOD2P04179 AP005117.1-202ENST00000581724 1908 ntBASIC16.08■□□□□ 0.16
SOD2P04179 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SOD2P04179 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SOD2P04179 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.08■□□□□ 0.16
SOD2P04179 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SOD2P04179 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SOD2P04179 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
SOD2P04179 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.08■□□□□ 0.16
SOD2P04179 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SOD2P04179 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
SOD2P04179 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SOD2P04179 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
SOD2P04179 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.08■□□□□ 0.16
SOD2P04179 DEF8-202ENST00000418391 852 ntTSL 2 BASIC16.08■□□□□ 0.16
SOD2P04179 KRTAP19-9P-201ENST00000421795 191 ntBASIC16.08■□□□□ 0.16
SOD2P04179 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SOD2P04179 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.08■□□□□ 0.16
SOD2P04179 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SOD2P04179 RERG-205ENST00000537647 935 ntTSL 2 BASIC16.08■□□□□ 0.16
SOD2P04179 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.08■□□□□ 0.16
SOD2P04179 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.08■□□□□ 0.16
SOD2P04179 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SOD2P04179 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
SOD2P04179 MST1L-201ENST00000442552 2185 ntBASIC16.08■□□□□ 0.16
SOD2P04179 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SOD2P04179 KRT8P29-201ENST00000420409 1371 ntBASIC16.08■□□□□ 0.16
SOD2P04179 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SOD2P04179 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SOD2P04179 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SOD2P04179 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.08■□□□□ 0.16
SOD2P04179 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SOD2P04179 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SOD2P04179 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SOD2P04179 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SOD2P04179 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SOD2P04179 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SOD2P04179 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SOD2P04179 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.08■□□□□ 0.16
SOD2P04179 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOD2P04179 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SOD2P04179 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.07■□□□□ 0.16
SOD2P04179 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SOD2P04179 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.07■□□□□ 0.16
SOD2P04179 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.07■□□□□ 0.16
SOD2P04179 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SOD2P04179 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOD2P04179 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.07■□□□□ 0.16
SOD2P04179 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.07■□□□□ 0.16
SOD2P04179 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SOD2P04179 HLA-DPB2-205ENST00000435074 1188 ntBASIC16.07■□□□□ 0.16
SOD2P04179 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SOD2P04179 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.07■□□□□ 0.16
SOD2P04179 AC021723.1-201ENST00000486306 515 ntBASIC16.07■□□□□ 0.16
SOD2P04179 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOD2P04179 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.07■□□□□ 0.16
SOD2P04179 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SOD2P04179 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC16.07■□□□□ 0.16
SOD2P04179 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SOD2P04179 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SOD2P04179 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SOD2P04179 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.07■□□□□ 0.16
SOD2P04179 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms