Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
APOBP04114 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
APOBP04114 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC9.31□□□□□ -0.92
APOBP04114 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC9.31□□□□□ -0.92
APOBP04114 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
APOBP04114 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
APOBP04114 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC9.31□□□□□ -0.92
APOBP04114 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC9.31□□□□□ -0.92
APOBP04114 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC9.31□□□□□ -0.92
APOBP04114 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
APOBP04114 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC9.31□□□□□ -0.92
APOBP04114 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
APOBP04114 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
APOBP04114 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC9.31□□□□□ -0.92
APOBP04114 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
APOBP04114 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
APOBP04114 AC106827.1-201ENST00000366454 431 ntBASIC9.31□□□□□ -0.92
APOBP04114 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
APOBP04114 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC9.31□□□□□ -0.92
APOBP04114 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC9.31□□□□□ -0.92
APOBP04114 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC9.31□□□□□ -0.92
APOBP04114 AL354861.1-201ENST00000445213 355 ntBASIC9.31□□□□□ -0.92
APOBP04114 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC9.31□□□□□ -0.92
APOBP04114 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC9.31□□□□□ -0.92
APOBP04114 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC9.31□□□□□ -0.92
APOBP04114 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC9.31□□□□□ -0.92
APOBP04114 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
APOBP04114 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC9.31□□□□□ -0.92
APOBP04114 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
APOBP04114 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
APOBP04114 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
APOBP04114 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC9.31□□□□□ -0.92
APOBP04114 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC9.31□□□□□ -0.92
APOBP04114 AC112504.1-201ENST00000623415 1841 ntBASIC9.31□□□□□ -0.92
APOBP04114 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
APOBP04114 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
APOBP04114 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC9.31□□□□□ -0.92
APOBP04114 RAN-210ENST00000541630 1475 ntTSL 2 BASIC9.31□□□□□ -0.92
APOBP04114 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
APOBP04114 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
APOBP04114 GCK-209ENST00000616242 2260 ntTSL 5 BASIC9.31□□□□□ -0.92
APOBP04114 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC9.31□□□□□ -0.92
APOBP04114 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
APOBP04114 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
APOBP04114 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
APOBP04114 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
APOBP04114 AC004837.1-201ENST00000446267 564 ntBASIC9.31□□□□□ -0.92
APOBP04114 HNRNPA1P42-201ENST00000458678 957 ntBASIC9.31□□□□□ -0.92
APOBP04114 AC100827.2-201ENST00000563214 1194 ntBASIC9.31□□□□□ -0.92
APOBP04114 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
APOBP04114 MIR6769A-201ENST00000617340 73 ntBASIC9.31□□□□□ -0.92
APOBP04114 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC9.31□□□□□ -0.92
APOBP04114 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
APOBP04114 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
APOBP04114 AC006058.4-201ENST00000624016 1670 ntBASIC9.3□□□□□ -0.92
APOBP04114 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC9.3□□□□□ -0.92
APOBP04114 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC9.3□□□□□ -0.92
APOBP04114 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
APOBP04114 FAM90A2P-201ENST00000511144 1395 ntBASIC9.3□□□□□ -0.92
APOBP04114 FAM90A25P-201ENST00000528404 1395 ntBASIC9.3□□□□□ -0.92
APOBP04114 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
APOBP04114 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC9.3□□□□□ -0.92
APOBP04114 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
APOBP04114 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC9.3□□□□□ -0.92
APOBP04114 AC108734.2-201ENST00000420887 1069 ntBASIC9.3□□□□□ -0.92
APOBP04114 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
APOBP04114 DUTP3-201ENST00000450025 415 ntBASIC9.3□□□□□ -0.92
APOBP04114 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC9.3□□□□□ -0.92
APOBP04114 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
APOBP04114 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
APOBP04114 HELLS-212ENST00000630929 400 ntTSL 5 BASIC9.3□□□□□ -0.92
APOBP04114 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
APOBP04114 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
APOBP04114 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
APOBP04114 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
APOBP04114 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
APOBP04114 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
APOBP04114 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
APOBP04114 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC9.3□□□□□ -0.92
APOBP04114 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
APOBP04114 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC9.3□□□□□ -0.92
APOBP04114 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
APOBP04114 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
APOBP04114 AL109809.1-201ENST00000418979 1367 ntBASIC9.3□□□□□ -0.92
APOBP04114 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
APOBP04114 KRT17P5-201ENST00000332088 839 ntBASIC9.3□□□□□ -0.92
APOBP04114 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC9.3□□□□□ -0.92
APOBP04114 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
APOBP04114 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC9.3□□□□□ -0.92
APOBP04114 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC9.3□□□□□ -0.92
APOBP04114 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC9.3□□□□□ -0.92
APOBP04114 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
APOBP04114 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
APOBP04114 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
APOBP04114 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
APOBP04114 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
APOBP04114 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC9.3□□□□□ -0.92
APOBP04114 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
APOBP04114 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC9.3□□□□□ -0.92
APOBP04114 AL672207.1-201ENST00000328462 1570 ntBASIC9.3□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms