Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.86□□□□□ -0.19
APOA1P02647 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.86□□□□□ -0.19
APOA1P02647 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC13.86□□□□□ -0.19
APOA1P02647 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOA1P02647 AC022616.7-201ENST00000525383 220 ntBASIC13.86□□□□□ -0.19
APOA1P02647 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC13.86□□□□□ -0.19
APOA1P02647 PNN-202ENST00000553331 656 ntTSL 3 BASIC13.86□□□□□ -0.19
APOA1P02647 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.86□□□□□ -0.19
APOA1P02647 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
APOA1P02647 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
APOA1P02647 METTL23-204ENST00000586752 904 ntTSL 2 BASIC13.86□□□□□ -0.19
APOA1P02647 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
APOA1P02647 AC092329.2-201ENST00000598402 547 ntBASIC13.86□□□□□ -0.19
APOA1P02647 AC012306.2-201ENST00000609350 630 ntBASIC13.86□□□□□ -0.19
APOA1P02647 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.86□□□□□ -0.19
APOA1P02647 AC004706.3-202ENST00000621574 984 ntBASIC13.86□□□□□ -0.19
APOA1P02647 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC13.86□□□□□ -0.19
APOA1P02647 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.86□□□□□ -0.19
APOA1P02647 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
APOA1P02647 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC13.86□□□□□ -0.19
APOA1P02647 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC13.86□□□□□ -0.19
APOA1P02647 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
APOA1P02647 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.86□□□□□ -0.19
APOA1P02647 PCDHA5-203ENST00000614258 4248 ntBASIC13.86□□□□□ -0.19
APOA1P02647 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
APOA1P02647 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC13.86□□□□□ -0.19
APOA1P02647 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOA1P02647 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOA1P02647 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOA1P02647 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOA1P02647 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.86□□□□□ -0.19
APOA1P02647 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOA1P02647 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOA1P02647 AL139385.1-201ENST00000611744 3272 ntBASIC13.86□□□□□ -0.19
APOA1P02647 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOA1P02647 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
APOA1P02647 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOA1P02647 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOA1P02647 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOA1P02647 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
APOA1P02647 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.85□□□□□ -0.19
APOA1P02647 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.85□□□□□ -0.19
APOA1P02647 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
APOA1P02647 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOA1P02647 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOA1P02647 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
APOA1P02647 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
APOA1P02647 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
APOA1P02647 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
APOA1P02647 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
APOA1P02647 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.85□□□□□ -0.19
APOA1P02647 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOA1P02647 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOA1P02647 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOA1P02647 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOA1P02647 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOA1P02647 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOA1P02647 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
APOA1P02647 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOA1P02647 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC13.85□□□□□ -0.19
APOA1P02647 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOA1P02647 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC13.85□□□□□ -0.19
APOA1P02647 KRT18P57-201ENST00000443599 1254 ntBASIC13.85□□□□□ -0.19
APOA1P02647 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.85□□□□□ -0.19
APOA1P02647 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
APOA1P02647 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.85□□□□□ -0.19
APOA1P02647 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC13.85□□□□□ -0.19
APOA1P02647 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC13.85□□□□□ -0.19
APOA1P02647 NKAPP1-205ENST00000585790 367 ntBASIC13.85□□□□□ -0.19
APOA1P02647 AC091076.1-201ENST00000610741 619 ntBASIC13.85□□□□□ -0.19
APOA1P02647 AC097493.4-201ENST00000641197 219 ntBASIC13.85□□□□□ -0.19
APOA1P02647 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
APOA1P02647 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
APOA1P02647 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
APOA1P02647 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
APOA1P02647 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOA1P02647 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
APOA1P02647 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOA1P02647 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.85□□□□□ -0.19
APOA1P02647 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOA1P02647 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
APOA1P02647 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
APOA1P02647 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.85□□□□□ -0.19
APOA1P02647 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOA1P02647 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
APOA1P02647 AC012569.1-201ENST00000591191 1524 ntBASIC13.85□□□□□ -0.19
APOA1P02647 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
APOA1P02647 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13.85□□□□□ -0.19
APOA1P02647 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOA1P02647 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.84□□□□□ -0.19
APOA1P02647 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOA1P02647 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC13.84□□□□□ -0.19
APOA1P02647 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APOA1P02647 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOA1P02647 MST1P2-201ENST00000457982 2291 ntBASIC13.84□□□□□ -0.19
APOA1P02647 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
APOA1P02647 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOA1P02647 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC13.84□□□□□ -0.19
APOA1P02647 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APOA1P02647 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms