Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.01□□□□□ -0.33
ABCA1O95477 AC015967.2-201ENST00000624092 234 ntBASIC13.01□□□□□ -0.33
ABCA1O95477 AC006435.4-201ENST00000625037 234 ntBASIC13.01□□□□□ -0.33
ABCA1O95477 AL356737.1-201ENST00000634391 234 ntBASIC13.01□□□□□ -0.33
ABCA1O95477 AC008687.7-202ENST00000637404 953 ntBASIC13.01□□□□□ -0.33
ABCA1O95477 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.01□□□□□ -0.33
ABCA1O95477 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
ABCA1O95477 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ABCA1O95477 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ABCA1O95477 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.01□□□□□ -0.33
ABCA1O95477 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ABCA1O95477 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ABCA1O95477 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ABCA1O95477 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ABCA1O95477 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ABCA1O95477 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ABCA1O95477 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
ABCA1O95477 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ABCA1O95477 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ABCA1O95477 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ABCA1O95477 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
ABCA1O95477 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ABCA1O95477 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ABCA1O95477 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ABCA1O95477 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.01□□□□□ -0.33
ABCA1O95477 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.01□□□□□ -0.33
ABCA1O95477 C2orf27AP3-201ENST00000434123 579 ntBASIC13.01□□□□□ -0.33
ABCA1O95477 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ABCA1O95477 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.01□□□□□ -0.33
ABCA1O95477 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.01□□□□□ -0.33
ABCA1O95477 AC005695.3-201ENST00000614522 232 ntBASIC13.01□□□□□ -0.33
ABCA1O95477 AL354718.3-201ENST00000616414 581 ntBASIC13.01□□□□□ -0.33
ABCA1O95477 CR382287.1-201ENST00000623954 586 ntBASIC13.01□□□□□ -0.33
ABCA1O95477 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.01□□□□□ -0.33
ABCA1O95477 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
ABCA1O95477 DRD5P1-201ENST00000456605 1438 ntBASIC13.01□□□□□ -0.33
ABCA1O95477 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ABCA1O95477 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ABCA1O95477 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ABCA1O95477 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.01□□□□□ -0.33
ABCA1O95477 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ABCA1O95477 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ABCA1O95477 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ABCA1O95477 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ABCA1O95477 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ABCA1O95477 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
ABCA1O95477 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ABCA1O95477 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
ABCA1O95477 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13□□□□□ -0.33
ABCA1O95477 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13□□□□□ -0.33
ABCA1O95477 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ABCA1O95477 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13□□□□□ -0.33
ABCA1O95477 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13□□□□□ -0.33
ABCA1O95477 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ABCA1O95477 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13□□□□□ -0.33
ABCA1O95477 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13□□□□□ -0.33
ABCA1O95477 BNIP3P1-202ENST00000550043 1585 ntBASIC13□□□□□ -0.33
ABCA1O95477 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ABCA1O95477 CYP2AB1P-202ENST00000454440 1456 ntBASIC13□□□□□ -0.33
ABCA1O95477 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
ABCA1O95477 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
ABCA1O95477 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ABCA1O95477 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC13□□□□□ -0.33
ABCA1O95477 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC13□□□□□ -0.33
ABCA1O95477 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
ABCA1O95477 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC13□□□□□ -0.33
ABCA1O95477 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
ABCA1O95477 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ABCA1O95477 NEU3-202ENST00000526068 431 ntTSL 2 BASIC13□□□□□ -0.33
ABCA1O95477 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13□□□□□ -0.33
ABCA1O95477 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13□□□□□ -0.33
ABCA1O95477 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13□□□□□ -0.33
ABCA1O95477 AL021578.1-201ENST00000613646 709 ntBASIC13□□□□□ -0.33
ABCA1O95477 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
ABCA1O95477 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
ABCA1O95477 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
ABCA1O95477 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
ABCA1O95477 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
ABCA1O95477 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ABCA1O95477 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ABCA1O95477 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13□□□□□ -0.33
ABCA1O95477 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ABCA1O95477 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
ABCA1O95477 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
ABCA1O95477 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13□□□□□ -0.33
ABCA1O95477 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ABCA1O95477 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ABCA1O95477 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
ABCA1O95477 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
ABCA1O95477 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
ABCA1O95477 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13□□□□□ -0.33
ABCA1O95477 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13□□□□□ -0.33
ABCA1O95477 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13□□□□□ -0.33
ABCA1O95477 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
ABCA1O95477 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13□□□□□ -0.33
ABCA1O95477 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13□□□□□ -0.33
ABCA1O95477 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
ABCA1O95477 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
ABCA1O95477 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13□□□□□ -0.33
ABCA1O95477 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms