Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
ZIC3O60481 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC3O60481 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
ZIC3O60481 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC3O60481 OR8S1-201ENST00000310194 1080 ntBASIC13.84□□□□□ -0.19
ZIC3O60481 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
ZIC3O60481 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.84□□□□□ -0.19
ZIC3O60481 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.84□□□□□ -0.19
ZIC3O60481 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC3O60481 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.84□□□□□ -0.19
ZIC3O60481 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.84□□□□□ -0.19
ZIC3O60481 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.84□□□□□ -0.19
ZIC3O60481 GPR53P-205ENST00000457298 1084 ntBASIC13.84□□□□□ -0.19
ZIC3O60481 ACA64.2-201ENST00000459014 129 ntBASIC13.84□□□□□ -0.19
ZIC3O60481 AC106760.1-201ENST00000508690 800 ntBASIC13.84□□□□□ -0.19
ZIC3O60481 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC3O60481 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.84□□□□□ -0.19
ZIC3O60481 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.84□□□□□ -0.19
ZIC3O60481 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.84□□□□□ -0.19
ZIC3O60481 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
ZIC3O60481 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC3O60481 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC3O60481 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC3O60481 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
ZIC3O60481 AC012508.2-201ENST00000567613 1472 ntBASIC13.84□□□□□ -0.19
ZIC3O60481 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC3O60481 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.84□□□□□ -0.19
ZIC3O60481 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.84□□□□□ -0.19
ZIC3O60481 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC3O60481 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC3O60481 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
ZIC3O60481 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC3O60481 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC3O60481 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC3O60481 KRT8P35-201ENST00000483942 1338 ntBASIC13.84□□□□□ -0.19
ZIC3O60481 AL360270.3-201ENST00000609118 1348 ntBASIC13.84□□□□□ -0.19
ZIC3O60481 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
ZIC3O60481 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC3O60481 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC3O60481 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC3O60481 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.84□□□□□ -0.19
ZIC3O60481 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.84□□□□□ -0.19
ZIC3O60481 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ZIC3O60481 AC138035.3-201ENST00000622706 2791 ntBASIC13.83□□□□□ -0.19
ZIC3O60481 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
ZIC3O60481 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.83□□□□□ -0.19
ZIC3O60481 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
ZIC3O60481 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
ZIC3O60481 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC3O60481 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.83□□□□□ -0.2
ZIC3O60481 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
ZIC3O60481 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC3O60481 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
ZIC3O60481 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC3O60481 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
ZIC3O60481 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC3O60481 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC3O60481 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.83□□□□□ -0.2
ZIC3O60481 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC3O60481 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC3O60481 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.83□□□□□ -0.2
ZIC3O60481 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC3O60481 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC3O60481 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.83□□□□□ -0.2
ZIC3O60481 ACTBP8-201ENST00000403258 1108 ntBASIC13.83□□□□□ -0.2
ZIC3O60481 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.83□□□□□ -0.2
ZIC3O60481 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.83□□□□□ -0.2
ZIC3O60481 ARSEP1-201ENST00000420443 635 ntBASIC13.83□□□□□ -0.2
ZIC3O60481 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.83□□□□□ -0.2
ZIC3O60481 KRT43P-201ENST00000434019 910 ntBASIC13.83□□□□□ -0.2
ZIC3O60481 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.83□□□□□ -0.2
ZIC3O60481 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.83□□□□□ -0.2
ZIC3O60481 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.83□□□□□ -0.2
ZIC3O60481 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.83□□□□□ -0.2
ZIC3O60481 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.83□□□□□ -0.2
ZIC3O60481 HILS1-202ENST00000545329 423 ntBASIC13.83□□□□□ -0.2
ZIC3O60481 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.83□□□□□ -0.2
ZIC3O60481 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.83□□□□□ -0.2
ZIC3O60481 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.83□□□□□ -0.2
ZIC3O60481 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.83□□□□□ -0.2
ZIC3O60481 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.83□□□□□ -0.2
ZIC3O60481 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC3O60481 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC3O60481 AC145423.3-201ENST00000615987 467 ntBASIC13.83□□□□□ -0.2
ZIC3O60481 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.83□□□□□ -0.2
ZIC3O60481 REXO1L4P-201ENST00000605109 1937 ntBASIC13.83□□□□□ -0.2
ZIC3O60481 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
ZIC3O60481 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
ZIC3O60481 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC3O60481 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC3O60481 MST1L-201ENST00000442552 2185 ntBASIC13.83□□□□□ -0.2
ZIC3O60481 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC3O60481 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.2
ZIC3O60481 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC3O60481 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC3O60481 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
ZIC3O60481 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC3O60481 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
ZIC3O60481 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.83□□□□□ -0.2
ZIC3O60481 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms