Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AL138799.1-201ENST00000448213 1675 ntBASIC14.77□□□□□ -0.05
LCMT2O60294 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LCMT2O60294 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LCMT2O60294 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LCMT2O60294 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.77□□□□□ -0.05
LCMT2O60294 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LCMT2O60294 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.77□□□□□ -0.05
LCMT2O60294 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.77□□□□□ -0.05
LCMT2O60294 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LCMT2O60294 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LCMT2O60294 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LCMT2O60294 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.76□□□□□ -0.05
LCMT2O60294 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LCMT2O60294 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LCMT2O60294 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LCMT2O60294 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.76□□□□□ -0.05
LCMT2O60294 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
LCMT2O60294 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.76□□□□□ -0.05
LCMT2O60294 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LCMT2O60294 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LCMT2O60294 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LCMT2O60294 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.76□□□□□ -0.05
LCMT2O60294 AC104457.1-201ENST00000401024 814 ntBASIC14.76□□□□□ -0.05
LCMT2O60294 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.76□□□□□ -0.05
LCMT2O60294 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.76□□□□□ -0.05
LCMT2O60294 RPL13AP25-201ENST00000484130 612 ntBASIC14.76□□□□□ -0.05
LCMT2O60294 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.76□□□□□ -0.05
LCMT2O60294 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
LCMT2O60294 AP005018.1-201ENST00000525475 301 ntBASIC14.76□□□□□ -0.05
LCMT2O60294 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.76□□□□□ -0.05
LCMT2O60294 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.76□□□□□ -0.05
LCMT2O60294 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LCMT2O60294 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.76□□□□□ -0.05
LCMT2O60294 AC124283.3-201ENST00000570869 594 ntBASIC14.76□□□□□ -0.05
LCMT2O60294 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.76□□□□□ -0.05
LCMT2O60294 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.76□□□□□ -0.05
LCMT2O60294 LINC02084-201ENST00000606069 1096 ntBASIC14.76□□□□□ -0.05
LCMT2O60294 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.76□□□□□ -0.05
LCMT2O60294 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LCMT2O60294 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
LCMT2O60294 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.76□□□□□ -0.05
LCMT2O60294 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LCMT2O60294 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
LCMT2O60294 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LCMT2O60294 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LCMT2O60294 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.76□□□□□ -0.05
LCMT2O60294 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LCMT2O60294 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LCMT2O60294 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.76□□□□□ -0.05
LCMT2O60294 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.76□□□□□ -0.05
LCMT2O60294 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.76□□□□□ -0.05
LCMT2O60294 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LCMT2O60294 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LCMT2O60294 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
LCMT2O60294 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LCMT2O60294 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LCMT2O60294 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LCMT2O60294 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.76□□□□□ -0.05
LCMT2O60294 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
LCMT2O60294 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LCMT2O60294 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LCMT2O60294 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LCMT2O60294 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LCMT2O60294 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LCMT2O60294 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LCMT2O60294 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.75□□□□□ -0.05
LCMT2O60294 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
LCMT2O60294 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.75□□□□□ -0.05
LCMT2O60294 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.75□□□□□ -0.05
LCMT2O60294 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LCMT2O60294 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LCMT2O60294 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LCMT2O60294 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LCMT2O60294 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LCMT2O60294 C1QBPP1-201ENST00000400117 770 ntBASIC14.75□□□□□ -0.05
LCMT2O60294 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.75□□□□□ -0.05
LCMT2O60294 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LCMT2O60294 GHSR-202ENST00000427970 912 ntBASIC14.75□□□□□ -0.05
LCMT2O60294 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.75□□□□□ -0.05
LCMT2O60294 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.75□□□□□ -0.05
LCMT2O60294 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LCMT2O60294 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.75□□□□□ -0.05
LCMT2O60294 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.75□□□□□ -0.05
LCMT2O60294 AC133539.2-201ENST00000604757 467 ntBASIC14.75□□□□□ -0.05
LCMT2O60294 AC093813.1-201ENST00000605066 256 ntBASIC14.75□□□□□ -0.05
LCMT2O60294 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LCMT2O60294 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
LCMT2O60294 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LCMT2O60294 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LCMT2O60294 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LCMT2O60294 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.75□□□□□ -0.05
LCMT2O60294 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.75□□□□□ -0.05
LCMT2O60294 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.75□□□□□ -0.05
LCMT2O60294 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
LCMT2O60294 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.75□□□□□ -0.05
LCMT2O60294 KRT8P22-201ENST00000562317 1415 ntBASIC14.75□□□□□ -0.05
LCMT2O60294 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LCMT2O60294 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
LCMT2O60294 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LCMT2O60294 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms