Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PEX1O43933 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PEX1O43933 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PEX1O43933 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PEX1O43933 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PEX1O43933 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.17■□□□□ 0.02
PEX1O43933 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PEX1O43933 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PEX1O43933 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PEX1O43933 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PEX1O43933 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PEX1O43933 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
PEX1O43933 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PEX1O43933 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PEX1O43933 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.17■□□□□ 0.02
PEX1O43933 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.17■□□□□ 0.02
PEX1O43933 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
PEX1O43933 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PEX1O43933 GPS2P2-201ENST00000430745 888 ntBASIC15.17■□□□□ 0.02
PEX1O43933 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PEX1O43933 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.17■□□□□ 0.02
PEX1O43933 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PEX1O43933 SLC25A39P2-201ENST00000537614 270 ntBASIC15.17■□□□□ 0.02
PEX1O43933 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.17■□□□□ 0.02
PEX1O43933 AL512356.2-201ENST00000546955 174 ntBASIC15.17■□□□□ 0.02
PEX1O43933 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.17■□□□□ 0.02
PEX1O43933 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PEX1O43933 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.17■□□□□ 0.02
PEX1O43933 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
PEX1O43933 AC084121.4-201ENST00000641598 221 ntBASIC15.17■□□□□ 0.02
PEX1O43933 AF228730.8-201ENST00000642140 221 ntBASIC15.17■□□□□ 0.02
PEX1O43933 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.17■□□□□ 0.02
PEX1O43933 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PEX1O43933 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
PEX1O43933 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PEX1O43933 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.17■□□□□ 0.02
PEX1O43933 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PEX1O43933 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PEX1O43933 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PEX1O43933 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PEX1O43933 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PEX1O43933 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.17■□□□□ 0.02
PEX1O43933 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PEX1O43933 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PEX1O43933 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PEX1O43933 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PEX1O43933 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PEX1O43933 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PEX1O43933 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PEX1O43933 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PEX1O43933 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PEX1O43933 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PEX1O43933 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PEX1O43933 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.16■□□□□ 0.02
PEX1O43933 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PEX1O43933 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PEX1O43933 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PEX1O43933 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PEX1O43933 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PEX1O43933 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PEX1O43933 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PEX1O43933 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PEX1O43933 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.16■□□□□ 0.02
PEX1O43933 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PEX1O43933 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PEX1O43933 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PEX1O43933 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.16■□□□□ 0.02
PEX1O43933 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.16■□□□□ 0.02
PEX1O43933 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PEX1O43933 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.16■□□□□ 0.02
PEX1O43933 AL138918.1-201ENST00000568306 659 ntBASIC15.16■□□□□ 0.02
PEX1O43933 AP000842.3-202ENST00000569238 1080 ntBASIC15.16■□□□□ 0.02
PEX1O43933 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PEX1O43933 AC015911.4-201ENST00000588022 1070 ntBASIC15.16■□□□□ 0.02
PEX1O43933 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PEX1O43933 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.16■□□□□ 0.02
PEX1O43933 AC009090.5-201ENST00000624886 2285 ntBASIC15.16■□□□□ 0.02
PEX1O43933 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
PEX1O43933 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
PEX1O43933 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PEX1O43933 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PEX1O43933 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
PEX1O43933 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PEX1O43933 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.16■□□□□ 0.02
PEX1O43933 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PEX1O43933 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.16■□□□□ 0.02
PEX1O43933 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PEX1O43933 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.16■□□□□ 0.02
PEX1O43933 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PEX1O43933 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.16■□□□□ 0.02
PEX1O43933 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PEX1O43933 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PEX1O43933 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PEX1O43933 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PEX1O43933 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PEX1O43933 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.15■□□□□ 0.02
PEX1O43933 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PEX1O43933 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PEX1O43933 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PEX1O43933 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms