Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.82□□□□□ -0.2
CXCL13O43927 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.82□□□□□ -0.2
CXCL13O43927 AL161772.1-201ENST00000610494 4412 ntBASIC13.82□□□□□ -0.2
CXCL13O43927 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
CXCL13O43927 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.82□□□□□ -0.2
CXCL13O43927 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL13O43927 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
CXCL13O43927 PCDHA3-202ENST00000532566 4594 ntBASIC13.81□□□□□ -0.2
CXCL13O43927 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.81□□□□□ -0.2
CXCL13O43927 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL13O43927 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL13O43927 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL13O43927 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL13O43927 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL13O43927 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL13O43927 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.81□□□□□ -0.2
CXCL13O43927 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL13O43927 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL13O43927 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CXCL13O43927 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL13O43927 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL13O43927 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
CXCL13O43927 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL13O43927 C18orf15-201ENST00000623680 2534 ntBASIC13.81□□□□□ -0.2
CXCL13O43927 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL13O43927 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL13O43927 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
CXCL13O43927 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CXCL13O43927 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL13O43927 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CXCL13O43927 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.81□□□□□ -0.2
CXCL13O43927 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.81□□□□□ -0.2
CXCL13O43927 TMEM14DP-201ENST00000422205 345 ntBASIC13.81□□□□□ -0.2
CXCL13O43927 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.81□□□□□ -0.2
CXCL13O43927 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.81□□□□□ -0.2
CXCL13O43927 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.81□□□□□ -0.2
CXCL13O43927 AC004066.1-201ENST00000502488 802 ntBASIC13.81□□□□□ -0.2
CXCL13O43927 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
CXCL13O43927 TDH-203ENST00000531764 1110 ntBASIC13.81□□□□□ -0.2
CXCL13O43927 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.81□□□□□ -0.2
CXCL13O43927 CLUHP6-201ENST00000580789 941 ntBASIC13.81□□□□□ -0.2
CXCL13O43927 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.81□□□□□ -0.2
CXCL13O43927 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.81□□□□□ -0.2
CXCL13O43927 RPSAP52-203ENST00000622976 1023 ntBASIC13.81□□□□□ -0.2
CXCL13O43927 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CXCL13O43927 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CXCL13O43927 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL13O43927 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL13O43927 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL13O43927 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.81□□□□□ -0.2
CXCL13O43927 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL13O43927 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CXCL13O43927 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CXCL13O43927 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL13O43927 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.81□□□□□ -0.2
CXCL13O43927 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL13O43927 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CXCL13O43927 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.81□□□□□ -0.2
CXCL13O43927 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.81□□□□□ -0.2
CXCL13O43927 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.81□□□□□ -0.2
CXCL13O43927 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL13O43927 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL13O43927 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC13.81□□□□□ -0.2
CXCL13O43927 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL13O43927 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL13O43927 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL13O43927 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.8□□□□□ -0.2
CXCL13O43927 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.8□□□□□ -0.2
CXCL13O43927 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL13O43927 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL13O43927 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL13O43927 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL13O43927 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.8□□□□□ -0.2
CXCL13O43927 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
CXCL13O43927 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC13.8□□□□□ -0.2
CXCL13O43927 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL13O43927 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL13O43927 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL13O43927 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CXCL13O43927 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CXCL13O43927 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.8□□□□□ -0.2
CXCL13O43927 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL13O43927 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.8□□□□□ -0.2
CXCL13O43927 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
CXCL13O43927 ACTG1P3-201ENST00000431775 1114 ntBASIC13.8□□□□□ -0.2
CXCL13O43927 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.8□□□□□ -0.2
CXCL13O43927 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL13O43927 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.8□□□□□ -0.2
CXCL13O43927 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.8□□□□□ -0.2
CXCL13O43927 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL13O43927 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.8□□□□□ -0.2
CXCL13O43927 AP001063.1-201ENST00000568332 529 ntBASIC13.8□□□□□ -0.2
CXCL13O43927 AC009486.1-201ENST00000569860 813 ntBASIC13.8□□□□□ -0.2
CXCL13O43927 MIR5189-201ENST00000577370 114 ntBASIC13.8□□□□□ -0.2
CXCL13O43927 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.8□□□□□ -0.2
CXCL13O43927 BX539320.1-201ENST00000623759 877 ntBASIC13.8□□□□□ -0.2
CXCL13O43927 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL13O43927 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CXCL13O43927 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.8□□□□□ -0.2
CXCL13O43927 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms