Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRICKLE3O43900 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.8□□□□□ -0.04
PRICKLE3O43900 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRICKLE3O43900 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PRICKLE3O43900 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.8□□□□□ -0.04
PRICKLE3O43900 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PRICKLE3O43900 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRICKLE3O43900 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRICKLE3O43900 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.8□□□□□ -0.04
PRICKLE3O43900 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRICKLE3O43900 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRICKLE3O43900 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PRICKLE3O43900 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PRICKLE3O43900 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
PRICKLE3O43900 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRICKLE3O43900 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PRICKLE3O43900 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PRICKLE3O43900 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRICKLE3O43900 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRICKLE3O43900 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PRICKLE3O43900 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRICKLE3O43900 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRICKLE3O43900 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PRICKLE3O43900 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRICKLE3O43900 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRICKLE3O43900 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRICKLE3O43900 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
PRICKLE3O43900 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
PRICKLE3O43900 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRICKLE3O43900 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
PRICKLE3O43900 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
PRICKLE3O43900 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRICKLE3O43900 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRICKLE3O43900 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
PRICKLE3O43900 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PRICKLE3O43900 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRICKLE3O43900 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRICKLE3O43900 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.79□□□□□ -0.04
PRICKLE3O43900 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.79□□□□□ -0.04
PRICKLE3O43900 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRICKLE3O43900 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.79□□□□□ -0.04
PRICKLE3O43900 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.79□□□□□ -0.04
PRICKLE3O43900 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.79□□□□□ -0.04
PRICKLE3O43900 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
PRICKLE3O43900 GIMAP3P-201ENST00000495150 836 ntBASIC14.79□□□□□ -0.04
PRICKLE3O43900 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.79□□□□□ -0.04
PRICKLE3O43900 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PRICKLE3O43900 USP32P1-208ENST00000506594 1164 ntBASIC14.79□□□□□ -0.04
PRICKLE3O43900 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PRICKLE3O43900 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.79□□□□□ -0.04
PRICKLE3O43900 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.79□□□□□ -0.04
PRICKLE3O43900 AC009486.1-201ENST00000569860 813 ntBASIC14.79□□□□□ -0.04
PRICKLE3O43900 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.79□□□□□ -0.04
PRICKLE3O43900 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
PRICKLE3O43900 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRICKLE3O43900 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.79□□□□□ -0.04
PRICKLE3O43900 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.79□□□□□ -0.04
PRICKLE3O43900 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.79□□□□□ -0.04
PRICKLE3O43900 AP005019.2-201ENST00000615104 511 ntBASIC14.79□□□□□ -0.04
PRICKLE3O43900 AL158070.2-201ENST00000623713 1621 ntBASIC14.79□□□□□ -0.04
PRICKLE3O43900 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.79□□□□□ -0.04
PRICKLE3O43900 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.79□□□□□ -0.04
PRICKLE3O43900 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.79□□□□□ -0.04
PRICKLE3O43900 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
PRICKLE3O43900 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.79□□□□□ -0.04
PRICKLE3O43900 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRICKLE3O43900 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRICKLE3O43900 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRICKLE3O43900 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
PRICKLE3O43900 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
PRICKLE3O43900 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
PRICKLE3O43900 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PRICKLE3O43900 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
PRICKLE3O43900 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRICKLE3O43900 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRICKLE3O43900 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.78□□□□□ -0.04
PRICKLE3O43900 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
PRICKLE3O43900 AC006486.2-201ENST00000624246 2199 ntBASIC14.78□□□□□ -0.04
PRICKLE3O43900 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
PRICKLE3O43900 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
PRICKLE3O43900 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.78□□□□□ -0.04
PRICKLE3O43900 MSTO2P-201ENST00000314835 1709 ntBASIC14.78□□□□□ -0.04
PRICKLE3O43900 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRICKLE3O43900 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
PRICKLE3O43900 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.78□□□□□ -0.04
PRICKLE3O43900 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRICKLE3O43900 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRICKLE3O43900 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRICKLE3O43900 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PRICKLE3O43900 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PRICKLE3O43900 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRICKLE3O43900 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.78□□□□□ -0.04
PRICKLE3O43900 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRICKLE3O43900 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
PRICKLE3O43900 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.78□□□□□ -0.04
PRICKLE3O43900 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
PRICKLE3O43900 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
PRICKLE3O43900 TMEM14DP-201ENST00000422205 345 ntBASIC14.78□□□□□ -0.04
PRICKLE3O43900 AC022494.1-201ENST00000466044 728 ntBASIC14.78□□□□□ -0.04
PRICKLE3O43900 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms