Protein–RNA interactions for Protein: O14543

SOCS3, Suppressor of cytokine signaling 3, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3O14543 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC11.67□□□□□ -0.54
SOCS3O14543 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SOCS3O14543 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SOCS3O14543 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SOCS3O14543 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SOCS3O14543 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SOCS3O14543 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC11.67□□□□□ -0.54
SOCS3O14543 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC11.67□□□□□ -0.54
SOCS3O14543 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SOCS3O14543 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SOCS3O14543 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
SOCS3O14543 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
SOCS3O14543 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SOCS3O14543 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC11.67□□□□□ -0.54
SOCS3O14543 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SOCS3O14543 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SOCS3O14543 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SOCS3O14543 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
SOCS3O14543 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC11.67□□□□□ -0.54
SOCS3O14543 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC11.67□□□□□ -0.54
SOCS3O14543 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SOCS3O14543 TSSK5P-201ENST00000423978 907 ntBASIC11.67□□□□□ -0.54
SOCS3O14543 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
SOCS3O14543 AC114501.2-201ENST00000439631 535 ntBASIC11.67□□□□□ -0.54
SOCS3O14543 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC11.67□□□□□ -0.54
SOCS3O14543 AC009477.1-201ENST00000452936 217 ntBASIC11.67□□□□□ -0.54
SOCS3O14543 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC11.67□□□□□ -0.54
SOCS3O14543 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC11.67□□□□□ -0.54
SOCS3O14543 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
SOCS3O14543 AC092337.1-201ENST00000568699 1129 ntBASIC11.67□□□□□ -0.54
SOCS3O14543 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SOCS3O14543 TEX48-202ENST00000612244 662 ntTSL 3 BASIC11.67□□□□□ -0.54
SOCS3O14543 AL590560.3-201ENST00000623350 461 ntBASIC11.67□□□□□ -0.54
SOCS3O14543 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
SOCS3O14543 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SOCS3O14543 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SOCS3O14543 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SOCS3O14543 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SOCS3O14543 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
SOCS3O14543 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SOCS3O14543 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SOCS3O14543 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC11.67□□□□□ -0.54
SOCS3O14543 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC11.67□□□□□ -0.54
SOCS3O14543 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SOCS3O14543 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
SOCS3O14543 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SOCS3O14543 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
SOCS3O14543 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC11.67□□□□□ -0.54
SOCS3O14543 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
SOCS3O14543 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
SOCS3O14543 PCDHGB8P-201ENST00000502926 1973 ntBASIC11.67□□□□□ -0.54
SOCS3O14543 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC11.67□□□□□ -0.54
SOCS3O14543 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SOCS3O14543 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SOCS3O14543 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SOCS3O14543 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
SOCS3O14543 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SOCS3O14543 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
SOCS3O14543 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SOCS3O14543 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SOCS3O14543 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SOCS3O14543 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SOCS3O14543 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC11.66□□□□□ -0.54
SOCS3O14543 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
SOCS3O14543 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SOCS3O14543 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
SOCS3O14543 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SOCS3O14543 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SOCS3O14543 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC11.66□□□□□ -0.54
SOCS3O14543 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SOCS3O14543 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SOCS3O14543 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SOCS3O14543 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SOCS3O14543 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC11.66□□□□□ -0.54
SOCS3O14543 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
SOCS3O14543 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
SOCS3O14543 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC11.66□□□□□ -0.54
SOCS3O14543 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SOCS3O14543 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SOCS3O14543 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
SOCS3O14543 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SOCS3O14543 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SOCS3O14543 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SOCS3O14543 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC11.66□□□□□ -0.54
SOCS3O14543 HNRNPA3P1-201ENST00000401429 1139 ntBASIC11.66□□□□□ -0.54
SOCS3O14543 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC11.66□□□□□ -0.54
SOCS3O14543 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC11.66□□□□□ -0.54
SOCS3O14543 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC11.66□□□□□ -0.54
SOCS3O14543 HNRNPA3P5-201ENST00000455201 833 ntBASIC11.66□□□□□ -0.54
SOCS3O14543 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC11.66□□□□□ -0.54
SOCS3O14543 PFN2-205ENST00000461868 613 ntTSL 2 BASIC11.66□□□□□ -0.54
SOCS3O14543 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
SOCS3O14543 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC11.66□□□□□ -0.54
SOCS3O14543 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC11.66□□□□□ -0.54
SOCS3O14543 AC139530.3-201ENST00000620344 690 ntBASIC11.66□□□□□ -0.54
SOCS3O14543 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC11.66□□□□□ -0.54
SOCS3O14543 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SOCS3O14543 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SOCS3O14543 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SOCS3O14543 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms