Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LOC285556D6RIA3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LOC285556D6RIA3 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LOC285556D6RIA3 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC17.2■□□□□ 0.34
LOC285556D6RIA3 AC026316.1-201ENST00000398900 414 ntBASIC17.2■□□□□ 0.34
LOC285556D6RIA3 RPSAP31-201ENST00000416648 895 ntBASIC17.2■□□□□ 0.34
LOC285556D6RIA3 PFN2-202ENST00000423691 911 ntTSL 2 BASIC17.2■□□□□ 0.34
LOC285556D6RIA3 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC17.2■□□□□ 0.34
LOC285556D6RIA3 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LOC285556D6RIA3 AC098935.1-201ENST00000446057 611 ntBASIC17.2■□□□□ 0.34
LOC285556D6RIA3 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC17.2■□□□□ 0.34
LOC285556D6RIA3 MBP-227ENST00000526111 581 ntTSL 4 BASIC17.2■□□□□ 0.34
LOC285556D6RIA3 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC17.2■□□□□ 0.34
LOC285556D6RIA3 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
LOC285556D6RIA3 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.2■□□□□ 0.34
LOC285556D6RIA3 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC17.2■□□□□ 0.34
LOC285556D6RIA3 COX6A1P2-201ENST00000620597 330 ntBASIC17.2■□□□□ 0.34
LOC285556D6RIA3 AC011491.1-203ENST00000637688 543 ntBASIC17.2■□□□□ 0.34
LOC285556D6RIA3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LOC285556D6RIA3 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LOC285556D6RIA3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.2■□□□□ 0.34
LOC285556D6RIA3 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LOC285556D6RIA3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
LOC285556D6RIA3 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LOC285556D6RIA3 ZBED1P1-201ENST00000502364 1930 ntBASIC17.2■□□□□ 0.34
LOC285556D6RIA3 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LOC285556D6RIA3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
LOC285556D6RIA3 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.2■□□□□ 0.34
LOC285556D6RIA3 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.2■□□□□ 0.34
LOC285556D6RIA3 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LOC285556D6RIA3 OR2K2-202ENST00000374428 1038 ntBASIC17.2■□□□□ 0.34
LOC285556D6RIA3 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC17.2■□□□□ 0.34
LOC285556D6RIA3 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
LOC285556D6RIA3 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC17.2■□□□□ 0.34
LOC285556D6RIA3 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LOC285556D6RIA3 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LOC285556D6RIA3 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LOC285556D6RIA3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.2■□□□□ 0.34
LOC285556D6RIA3 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LOC285556D6RIA3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LOC285556D6RIA3 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.19■□□□□ 0.34
LOC285556D6RIA3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
LOC285556D6RIA3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
LOC285556D6RIA3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LOC285556D6RIA3 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
LOC285556D6RIA3 AC084018.2-201ENST00000613093 2607 ntBASIC17.19■□□□□ 0.34
LOC285556D6RIA3 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LOC285556D6RIA3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
LOC285556D6RIA3 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LOC285556D6RIA3 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LOC285556D6RIA3 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LOC285556D6RIA3 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC17.19■□□□□ 0.34
LOC285556D6RIA3 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC17.19■□□□□ 0.34
LOC285556D6RIA3 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
LOC285556D6RIA3 AC131206.1-201ENST00000538078 1211 ntBASIC17.19■□□□□ 0.34
LOC285556D6RIA3 RPL17P45-201ENST00000586289 509 ntBASIC17.19■□□□□ 0.34
LOC285556D6RIA3 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
LOC285556D6RIA3 AC007881.3-201ENST00000608897 607 ntBASIC17.19■□□□□ 0.34
LOC285556D6RIA3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LOC285556D6RIA3 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LOC285556D6RIA3 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LOC285556D6RIA3 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC17.19■□□□□ 0.34
LOC285556D6RIA3 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LOC285556D6RIA3 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
LOC285556D6RIA3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LOC285556D6RIA3 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LOC285556D6RIA3 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LOC285556D6RIA3 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
LOC285556D6RIA3 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LOC285556D6RIA3 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LOC285556D6RIA3 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LOC285556D6RIA3 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LOC285556D6RIA3 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LOC285556D6RIA3 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LOC285556D6RIA3 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.18■□□□□ 0.34
LOC285556D6RIA3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.18■□□□□ 0.34
LOC285556D6RIA3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.18■□□□□ 0.34
LOC285556D6RIA3 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.18■□□□□ 0.34
LOC285556D6RIA3 AC092850.2-201ENST00000623821 2697 ntBASIC17.18■□□□□ 0.34
LOC285556D6RIA3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LOC285556D6RIA3 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LOC285556D6RIA3 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LOC285556D6RIA3 AL627389.1-201ENST00000413508 1182 ntBASIC17.18■□□□□ 0.34
LOC285556D6RIA3 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC17.18■□□□□ 0.34
LOC285556D6RIA3 CICP12-201ENST00000455801 843 ntBASIC17.18■□□□□ 0.34
LOC285556D6RIA3 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LOC285556D6RIA3 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC17.18■□□□□ 0.34
LOC285556D6RIA3 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
LOC285556D6RIA3 CTBP2P4-201ENST00000513884 920 ntBASIC17.18■□□□□ 0.34
LOC285556D6RIA3 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
LOC285556D6RIA3 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
LOC285556D6RIA3 NAT9-211ENST00000580632 799 ntTSL 3 BASIC17.18■□□□□ 0.34
LOC285556D6RIA3 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC17.18■□□□□ 0.34
LOC285556D6RIA3 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
LOC285556D6RIA3 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
LOC285556D6RIA3 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.18■□□□□ 0.34
LOC285556D6RIA3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LOC285556D6RIA3 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LOC285556D6RIA3 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC17.18■□□□□ 0.34
LOC285556D6RIA3 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms