Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 AC007787.1-201ENST00000588095 1583 ntBASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 RPL13AP20-201ENST00000459725 609 ntBASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 DUX4L45-201ENST00000566406 1057 ntBASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 GPR182-203ENST00000622922 591 ntBASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 AC148477.4-201ENST00000613430 1793 ntBASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.34■□□□□ 0.05
TBC1D3FA6NER0 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.33■□□□□ 0.05
TBC1D3FA6NER0 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
TBC1D3FA6NER0 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.33■□□□□ 0.05
TBC1D3FA6NER0 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TBC1D3FA6NER0 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
TBC1D3FA6NER0 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TBC1D3FA6NER0 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
TBC1D3FA6NER0 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 TPM3P8-201ENST00000330554 643 ntBASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 MIR1202-201ENST00000408529 83 ntBASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 AC008894.3-201ENST00000624324 3103 ntBASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TBC1D3FA6NER0 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms