Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
PLEKHD1A6NEE1 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PLEKHD1A6NEE1 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
PLEKHD1A6NEE1 AL355334.1-201ENST00000417713 215 ntBASIC23.34■■□□□ 1.33
PLEKHD1A6NEE1 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC23.34■■□□□ 1.33
PLEKHD1A6NEE1 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC23.34■■□□□ 1.33
PLEKHD1A6NEE1 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC23.34■■□□□ 1.33
PLEKHD1A6NEE1 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PLEKHD1A6NEE1 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC23.34■■□□□ 1.33
PLEKHD1A6NEE1 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
PLEKHD1A6NEE1 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC23.34■■□□□ 1.33
PLEKHD1A6NEE1 ACE-203ENST00000413513 2237 ntTSL 2 BASIC23.34■■□□□ 1.33
PLEKHD1A6NEE1 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PLEKHD1A6NEE1 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
PLEKHD1A6NEE1 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PLEKHD1A6NEE1 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PLEKHD1A6NEE1 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC23.34■■□□□ 1.33
PLEKHD1A6NEE1 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
PLEKHD1A6NEE1 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PLEKHD1A6NEE1 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
PLEKHD1A6NEE1 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PLEKHD1A6NEE1 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PLEKHD1A6NEE1 MBLAC2-202ENST00000514906 1936 ntBASIC23.33■■□□□ 1.33
PLEKHD1A6NEE1 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
PLEKHD1A6NEE1 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC23.33■■□□□ 1.33
PLEKHD1A6NEE1 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PLEKHD1A6NEE1 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PLEKHD1A6NEE1 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PLEKHD1A6NEE1 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
PLEKHD1A6NEE1 AL137783.1-201ENST00000623494 1896 ntBASIC23.33■■□□□ 1.33
PLEKHD1A6NEE1 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC23.33■■□□□ 1.33
PLEKHD1A6NEE1 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PLEKHD1A6NEE1 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC23.33■■□□□ 1.33
PLEKHD1A6NEE1 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC23.33■■□□□ 1.33
PLEKHD1A6NEE1 RPSAP31-201ENST00000416648 895 ntBASIC23.33■■□□□ 1.33
PLEKHD1A6NEE1 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC23.33■■□□□ 1.33
PLEKHD1A6NEE1 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC23.33■■□□□ 1.33
PLEKHD1A6NEE1 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC23.33■■□□□ 1.33
PLEKHD1A6NEE1 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC23.33■■□□□ 1.33
PLEKHD1A6NEE1 NAT9-211ENST00000580632 799 ntTSL 3 BASIC23.33■■□□□ 1.33
PLEKHD1A6NEE1 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC23.33■■□□□ 1.33
PLEKHD1A6NEE1 AC087045.2-201ENST00000606279 1003 ntBASIC23.33■■□□□ 1.33
PLEKHD1A6NEE1 AL805961.1-201ENST00000642026 753 ntBASIC23.33■■□□□ 1.33
PLEKHD1A6NEE1 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PLEKHD1A6NEE1 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PLEKHD1A6NEE1 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PLEKHD1A6NEE1 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PLEKHD1A6NEE1 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PLEKHD1A6NEE1 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PLEKHD1A6NEE1 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PLEKHD1A6NEE1 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC23.33■■□□□ 1.32
PLEKHD1A6NEE1 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PLEKHD1A6NEE1 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PLEKHD1A6NEE1 AL603832.2-201ENST00000566195 2125 ntBASIC23.32■■□□□ 1.32
PLEKHD1A6NEE1 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PLEKHD1A6NEE1 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PLEKHD1A6NEE1 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PLEKHD1A6NEE1 SCARNA21-201ENST00000517026 139 ntBASIC23.32■■□□□ 1.32
PLEKHD1A6NEE1 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC23.32■■□□□ 1.32
PLEKHD1A6NEE1 POU5F1P2-201ENST00000521750 823 ntBASIC23.32■■□□□ 1.32
PLEKHD1A6NEE1 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC23.32■■□□□ 1.32
PLEKHD1A6NEE1 AC092171.5-201ENST00000608012 942 ntBASIC23.32■■□□□ 1.32
PLEKHD1A6NEE1 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC23.32■■□□□ 1.32
PLEKHD1A6NEE1 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
PLEKHD1A6NEE1 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PLEKHD1A6NEE1 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PLEKHD1A6NEE1 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
PLEKHD1A6NEE1 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC23.32■■□□□ 1.32
PLEKHD1A6NEE1 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PLEKHD1A6NEE1 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC23.32■■□□□ 1.32
PLEKHD1A6NEE1 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC23.32■■□□□ 1.32
PLEKHD1A6NEE1 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC23.31■■□□□ 1.32
PLEKHD1A6NEE1 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
PLEKHD1A6NEE1 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
PLEKHD1A6NEE1 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC23.31■■□□□ 1.32
PLEKHD1A6NEE1 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PLEKHD1A6NEE1 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
PLEKHD1A6NEE1 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PLEKHD1A6NEE1 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PLEKHD1A6NEE1 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PLEKHD1A6NEE1 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC23.31■■□□□ 1.32
PLEKHD1A6NEE1 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC23.31■■□□□ 1.32
PLEKHD1A6NEE1 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
PLEKHD1A6NEE1 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PLEKHD1A6NEE1 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PLEKHD1A6NEE1 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
PLEKHD1A6NEE1 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PLEKHD1A6NEE1 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PLEKHD1A6NEE1 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC23.31■■□□□ 1.32
PLEKHD1A6NEE1 CFL1-206ENST00000527344 962 ntTSL 2 BASIC23.31■■□□□ 1.32
PLEKHD1A6NEE1 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC23.31■■□□□ 1.32
PLEKHD1A6NEE1 PGAM1P5-201ENST00000548011 764 ntBASIC23.31■■□□□ 1.32
PLEKHD1A6NEE1 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PLEKHD1A6NEE1 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
PLEKHD1A6NEE1 AC051619.9-201ENST00000623237 597 ntBASIC23.31■■□□□ 1.32
PLEKHD1A6NEE1 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PLEKHD1A6NEE1 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
PLEKHD1A6NEE1 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PLEKHD1A6NEE1 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PLEKHD1A6NEE1 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms