Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RCCD1A6NED2 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RCCD1A6NED2 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RCCD1A6NED2 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RCCD1A6NED2 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RCCD1A6NED2 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16.43■□□□□ 0.22
RCCD1A6NED2 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.43■□□□□ 0.22
RCCD1A6NED2 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RCCD1A6NED2 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RCCD1A6NED2 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RCCD1A6NED2 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.43■□□□□ 0.22
RCCD1A6NED2 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.43■□□□□ 0.22
RCCD1A6NED2 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.43■□□□□ 0.22
RCCD1A6NED2 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.43■□□□□ 0.22
RCCD1A6NED2 CEND1P1-201ENST00000451006 455 ntBASIC16.43■□□□□ 0.22
RCCD1A6NED2 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RCCD1A6NED2 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.43■□□□□ 0.22
RCCD1A6NED2 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.43■□□□□ 0.22
RCCD1A6NED2 AL079307.3-201ENST00000556114 283 ntBASIC16.43■□□□□ 0.22
RCCD1A6NED2 AC026150.2-201ENST00000564693 1156 ntBASIC16.43■□□□□ 0.22
RCCD1A6NED2 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.43■□□□□ 0.22
RCCD1A6NED2 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.43■□□□□ 0.22
RCCD1A6NED2 AC025048.3-201ENST00000590609 569 ntBASIC16.43■□□□□ 0.22
RCCD1A6NED2 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
RCCD1A6NED2 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RCCD1A6NED2 OR13I1P-201ENST00000609811 1264 ntBASIC16.43■□□□□ 0.22
RCCD1A6NED2 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.43■□□□□ 0.22
RCCD1A6NED2 AC005702.4-201ENST00000618393 416 ntBASIC16.43■□□□□ 0.22
RCCD1A6NED2 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
RCCD1A6NED2 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RCCD1A6NED2 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RCCD1A6NED2 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RCCD1A6NED2 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.43■□□□□ 0.22
RCCD1A6NED2 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RCCD1A6NED2 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
RCCD1A6NED2 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RCCD1A6NED2 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.43■□□□□ 0.22
RCCD1A6NED2 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RCCD1A6NED2 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RCCD1A6NED2 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.43■□□□□ 0.22
RCCD1A6NED2 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.43■□□□□ 0.22
RCCD1A6NED2 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RCCD1A6NED2 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RCCD1A6NED2 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RCCD1A6NED2 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RCCD1A6NED2 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RCCD1A6NED2 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC16.42■□□□□ 0.22
RCCD1A6NED2 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.42■□□□□ 0.22
RCCD1A6NED2 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
RCCD1A6NED2 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RCCD1A6NED2 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RCCD1A6NED2 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RCCD1A6NED2 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RCCD1A6NED2 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RCCD1A6NED2 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RCCD1A6NED2 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RCCD1A6NED2 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
RCCD1A6NED2 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RCCD1A6NED2 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
RCCD1A6NED2 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
RCCD1A6NED2 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RCCD1A6NED2 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RCCD1A6NED2 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RCCD1A6NED2 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RCCD1A6NED2 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
RCCD1A6NED2 MIR574-201ENST00000385209 96 ntBASIC16.42■□□□□ 0.22
RCCD1A6NED2 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RCCD1A6NED2 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RCCD1A6NED2 RBPMS2P1-201ENST00000437762 623 ntBASIC16.42■□□□□ 0.22
RCCD1A6NED2 RPL13P2-201ENST00000440687 659 ntBASIC16.42■□□□□ 0.22
RCCD1A6NED2 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.42■□□□□ 0.22
RCCD1A6NED2 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.42■□□□□ 0.22
RCCD1A6NED2 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.42■□□□□ 0.22
RCCD1A6NED2 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.42■□□□□ 0.22
RCCD1A6NED2 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.42■□□□□ 0.22
RCCD1A6NED2 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.42■□□□□ 0.22
RCCD1A6NED2 MIR4453-201ENST00000584019 89 ntBASIC16.42■□□□□ 0.22
RCCD1A6NED2 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.42■□□□□ 0.22
RCCD1A6NED2 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RCCD1A6NED2 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.42■□□□□ 0.22
RCCD1A6NED2 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RCCD1A6NED2 OS9-207ENST00000439210 1946 ntTSL 2 BASIC16.42■□□□□ 0.22
RCCD1A6NED2 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.42■□□□□ 0.22
RCCD1A6NED2 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RCCD1A6NED2 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RCCD1A6NED2 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC16.42■□□□□ 0.22
RCCD1A6NED2 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC16.42■□□□□ 0.22
RCCD1A6NED2 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RCCD1A6NED2 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RCCD1A6NED2 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RCCD1A6NED2 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.42■□□□□ 0.22
RCCD1A6NED2 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RCCD1A6NED2 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.42■□□□□ 0.22
RCCD1A6NED2 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RCCD1A6NED2 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RCCD1A6NED2 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RCCD1A6NED2 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RCCD1A6NED2 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RCCD1A6NED2 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC16.41■□□□□ 0.22
RCCD1A6NED2 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms