Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPDC1A2A3K4 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPDC1A2A3K4 LINC00528-201ENST00000600723 2160 ntBASIC18.17■□□□□ 0.5
PTPDC1A2A3K4 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPDC1A2A3K4 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPDC1A2A3K4 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPDC1A2A3K4 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PTPDC1A2A3K4 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPDC1A2A3K4 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC18.17■□□□□ 0.5
PTPDC1A2A3K4 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPDC1A2A3K4 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPDC1A2A3K4 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.17■□□□□ 0.5
PTPDC1A2A3K4 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
PTPDC1A2A3K4 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.17■□□□□ 0.5
PTPDC1A2A3K4 RN7SL837P-201ENST00000463010 287 ntBASIC18.17■□□□□ 0.5
PTPDC1A2A3K4 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.17■□□□□ 0.5
PTPDC1A2A3K4 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.17■□□□□ 0.5
PTPDC1A2A3K4 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.17■□□□□ 0.5
PTPDC1A2A3K4 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.17■□□□□ 0.5
PTPDC1A2A3K4 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.17■□□□□ 0.5
PTPDC1A2A3K4 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.17■□□□□ 0.5
PTPDC1A2A3K4 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.17■□□□□ 0.5
PTPDC1A2A3K4 WFDC1-204ENST00000613603 549 ntBASIC18.17■□□□□ 0.5
PTPDC1A2A3K4 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.17■□□□□ 0.5
PTPDC1A2A3K4 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPDC1A2A3K4 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPDC1A2A3K4 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPDC1A2A3K4 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
PTPDC1A2A3K4 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPDC1A2A3K4 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18.17■□□□□ 0.5
PTPDC1A2A3K4 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPDC1A2A3K4 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PTPDC1A2A3K4 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.17■□□□□ 0.5
PTPDC1A2A3K4 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.17■□□□□ 0.5
PTPDC1A2A3K4 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC18.17■□□□□ 0.5
PTPDC1A2A3K4 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 AL158212.4-201ENST00000624062 1286 ntBASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC18.16■□□□□ 0.5
PTPDC1A2A3K4 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPDC1A2A3K4 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.15■□□□□ 0.5
PTPDC1A2A3K4 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PTPDC1A2A3K4 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPDC1A2A3K4 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PTPDC1A2A3K4 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPDC1A2A3K4 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPDC1A2A3K4 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PTPDC1A2A3K4 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PTPDC1A2A3K4 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.15■□□□□ 0.5
PTPDC1A2A3K4 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPDC1A2A3K4 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
PTPDC1A2A3K4 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.15■□□□□ 0.5
PTPDC1A2A3K4 GPR53P-205ENST00000457298 1084 ntBASIC18.15■□□□□ 0.5
PTPDC1A2A3K4 RN7SL399P-201ENST00000471648 279 ntBASIC18.15■□□□□ 0.5
PTPDC1A2A3K4 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.15■□□□□ 0.5
PTPDC1A2A3K4 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.15■□□□□ 0.5
PTPDC1A2A3K4 AC036164.1-201ENST00000570544 333 ntBASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms