Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 SIGLEC29P-201ENST00000599873 1114 ntBASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 TBC1D3P5-201ENST00000579401 1545 ntBASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 ELN-216ENST00000429192 3298 ntAPPRIS ALT2 TSL 2 BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 ALDH18A1-202ENST00000371224 3359 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 ZNF606-201ENST00000341164 4248 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 AC011481.3-201ENST00000623895 5594 ntBASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
LINC01558Q9Y6Z2 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 G2E3-202ENST00000438909 2334 ntTSL 2 BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 PM20D1-201ENST00000367136 2152 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 AC124319.4-201ENST00000622931 2161 ntBASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 FLJ30679-201ENST00000624773 1980 ntBASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 MAX-212ENST00000555932 1673 ntTSL 5 BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 AP002414.1-201ENST00000391405 1147 ntBASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 AC004980.1-204ENST00000429707 299 ntBASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 STK25P1-201ENST00000585406 838 ntBASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
LINC01558Q9Y6Z2 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC7.9□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms