Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHB13Q9Y5F0 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 UGT1A2P-201ENST00000454886 866 ntBASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 DOC2GP-202ENST00000514950 1163 ntBASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 AC104794.3-201ENST00000566840 1248 ntBASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 AC104072.1-201ENST00000568817 668 ntBASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 MTATP6P25-201ENST00000574491 261 ntBASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 PSMG2-210ENST00000590217 1036 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 AC018695.4-201ENST00000602706 689 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 AL357094.1-201ENST00000603845 844 ntBASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 AC009118.2-201ENST00000613275 655 ntBASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHB13Q9Y5F0 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.34
PCDHB13Q9Y5F0 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PCDHB13Q9Y5F0 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PCDHB13Q9Y5F0 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
PCDHB13Q9Y5F0 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
PCDHB13Q9Y5F0 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB13Q9Y5F0 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB13Q9Y5F0 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB13Q9Y5F0 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB13Q9Y5F0 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB13Q9Y5F0 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB13Q9Y5F0 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB13Q9Y5F0 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB13Q9Y5F0 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB13Q9Y5F0 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB13Q9Y5F0 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB13Q9Y5F0 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PCDHB13Q9Y5F0 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHB13Q9Y5F0 AL117339.1-201ENST00000419779 428 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHB13Q9Y5F0 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
PCDHB13Q9Y5F0 TSPY16P-201ENST00000449843 468 ntBASIC17.2■□□□□ 0.34
PCDHB13Q9Y5F0 AL589987.1-201ENST00000453380 819 ntBASIC17.2■□□□□ 0.34
PCDHB13Q9Y5F0 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB13Q9Y5F0 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB13Q9Y5F0 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC17.2■□□□□ 0.34
PCDHB13Q9Y5F0 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB13Q9Y5F0 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.2■□□□□ 0.34
PCDHB13Q9Y5F0 AC009268.1-201ENST00000561352 1203 ntBASIC17.2■□□□□ 0.34
PCDHB13Q9Y5F0 SPCS2P1-201ENST00000561636 679 ntBASIC17.2■□□□□ 0.34
PCDHB13Q9Y5F0 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHB13Q9Y5F0 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHB13Q9Y5F0 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.2■□□□□ 0.34
PCDHB13Q9Y5F0 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHB13Q9Y5F0 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHB13Q9Y5F0 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB13Q9Y5F0 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
PCDHB13Q9Y5F0 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHB13Q9Y5F0 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB13Q9Y5F0 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB13Q9Y5F0 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB13Q9Y5F0 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB13Q9Y5F0 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
PCDHB13Q9Y5F0 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB13Q9Y5F0 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB13Q9Y5F0 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHB13Q9Y5F0 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms