Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00588Q9Y4M8 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00588Q9Y4M8 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC00588Q9Y4M8 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 ZBTB12BP-201ENST00000314232 1122 ntBASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 RNU1-114P-201ENST00000365297 166 ntBASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 GZMB-202ENST00000382540 816 ntTSL 5 BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 STX1A-203ENST00000395155 783 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 RPL5P21-201ENST00000404620 815 ntBASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 NUS1P3-201ENST00000423502 862 ntBASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 AC244669.2-201ENST00000612320 853 ntBASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 C1R-202ENST00000536053 2347 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 AC093525.8-201ENST00000624099 1342 ntBASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC00588Q9Y4M8 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 AC105250.1-201ENST00000509378 2057 ntBASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 KLF2P2-201ENST00000416807 1039 ntBASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 AC114812.1-204ENST00000449669 728 ntBASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 BNIP3P42-201ENST00000454982 569 ntBASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
LINC00588Q9Y4M8 AP000812.2-201ENST00000538934 718 ntBASIC10.56□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms