Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.48■□□□□ 0.07
VPS9D1Q9Y2B5 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
VPS9D1Q9Y2B5 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.48■□□□□ 0.07
VPS9D1Q9Y2B5 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.48■□□□□ 0.07
VPS9D1Q9Y2B5 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VPS9D1Q9Y2B5 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
VPS9D1Q9Y2B5 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VPS9D1Q9Y2B5 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VPS9D1Q9Y2B5 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.47■□□□□ 0.07
VPS9D1Q9Y2B5 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.47■□□□□ 0.07
VPS9D1Q9Y2B5 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VPS9D1Q9Y2B5 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VPS9D1Q9Y2B5 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
VPS9D1Q9Y2B5 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
VPS9D1Q9Y2B5 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VPS9D1Q9Y2B5 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VPS9D1Q9Y2B5 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
VPS9D1Q9Y2B5 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.47■□□□□ 0.07
VPS9D1Q9Y2B5 GHSR-202ENST00000427970 912 ntBASIC15.47■□□□□ 0.07
VPS9D1Q9Y2B5 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.47■□□□□ 0.07
VPS9D1Q9Y2B5 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VPS9D1Q9Y2B5 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.47■□□□□ 0.07
VPS9D1Q9Y2B5 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC15.47■□□□□ 0.07
VPS9D1Q9Y2B5 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VPS9D1Q9Y2B5 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.47■□□□□ 0.07
VPS9D1Q9Y2B5 AC087272.1-201ENST00000523624 533 ntBASIC15.47■□□□□ 0.07
VPS9D1Q9Y2B5 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
VPS9D1Q9Y2B5 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VPS9D1Q9Y2B5 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.47■□□□□ 0.07
VPS9D1Q9Y2B5 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.47■□□□□ 0.07
VPS9D1Q9Y2B5 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
VPS9D1Q9Y2B5 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
VPS9D1Q9Y2B5 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VPS9D1Q9Y2B5 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VPS9D1Q9Y2B5 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.47■□□□□ 0.07
VPS9D1Q9Y2B5 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VPS9D1Q9Y2B5 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.47■□□□□ 0.07
VPS9D1Q9Y2B5 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.47■□□□□ 0.07
VPS9D1Q9Y2B5 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VPS9D1Q9Y2B5 AL121723.1-201ENST00000445194 1519 ntBASIC15.47■□□□□ 0.07
VPS9D1Q9Y2B5 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VPS9D1Q9Y2B5 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.47■□□□□ 0.07
VPS9D1Q9Y2B5 AC144831.1-201ENST00000573312 2656 ntBASIC15.47■□□□□ 0.07
VPS9D1Q9Y2B5 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.47■□□□□ 0.07
VPS9D1Q9Y2B5 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VPS9D1Q9Y2B5 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VPS9D1Q9Y2B5 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 MROH4P-201ENST00000431302 1578 ntBASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 OLA1-206ENST00000428402 1270 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 KRT18P64-201ENST00000434946 1219 ntBASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 AC114501.2-201ENST00000439631 535 ntBASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 SETP12-201ENST00000514068 805 ntBASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 AC044860.1-202ENST00000559481 777 ntBASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 AC092337.1-201ENST00000568699 1129 ntBASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 AF228730.6-201ENST00000641497 218 ntBASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 AC084121.3-201ENST00000641716 218 ntBASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
VPS9D1Q9Y2B5 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.46■□□□□ 0.06
VPS9D1Q9Y2B5 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
VPS9D1Q9Y2B5 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
VPS9D1Q9Y2B5 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
VPS9D1Q9Y2B5 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
VPS9D1Q9Y2B5 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
VPS9D1Q9Y2B5 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms