Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 AL442647.2-201ENST00000429864 857 ntBASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 KRT43P-201ENST00000434019 910 ntBASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 KRT18P64-201ENST00000434946 1219 ntBASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 AL162726.2-201ENST00000438986 1017 ntBASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 AL450472.2-201ENST00000603663 1156 ntBASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 AL391069.4-201ENST00000609583 481 ntBASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 AC133552.6-201ENST00000613406 534 ntBASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
NPIPA1Q9UND3 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 AL359711.2-201ENST00000563105 872 ntBASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 AP005482.1-201ENST00000563722 1273 ntBASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 MIR4259-201ENST00000584466 101 ntBASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 MIR6775-201ENST00000617557 69 ntBASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 CICP13-201ENST00000422015 2789 ntBASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.29□□□□□ -0.12
NPIPA1Q9UND3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms