Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AC018638.5-201ENST00000450885 754 ntBASIC23.55■■□□□ 1.36
RIMBP3Q9UFD9 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC23.55■■□□□ 1.36
RIMBP3Q9UFD9 TMA16-204ENST00000508268 608 ntTSL 2 BASIC23.55■■□□□ 1.36
RIMBP3Q9UFD9 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
RIMBP3Q9UFD9 MIEF1-215ENST00000637854 213 ntBASIC23.55■■□□□ 1.36
RIMBP3Q9UFD9 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RIMBP3Q9UFD9 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RIMBP3Q9UFD9 FKBP4P8-201ENST00000610931 1369 ntBASIC23.55■■□□□ 1.36
RIMBP3Q9UFD9 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC23.55■■□□□ 1.36
RIMBP3Q9UFD9 AC006372.4-201ENST00000624122 1543 ntBASIC23.55■■□□□ 1.36
RIMBP3Q9UFD9 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RIMBP3Q9UFD9 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RIMBP3Q9UFD9 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RIMBP3Q9UFD9 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC23.55■■□□□ 1.36
RIMBP3Q9UFD9 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RIMBP3Q9UFD9 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RIMBP3Q9UFD9 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
RIMBP3Q9UFD9 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
RIMBP3Q9UFD9 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC23.55■■□□□ 1.36
RIMBP3Q9UFD9 CDK4P1-201ENST00000454213 828 ntBASIC23.55■■□□□ 1.36
RIMBP3Q9UFD9 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC23.55■■□□□ 1.36
RIMBP3Q9UFD9 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC23.55■■□□□ 1.36
RIMBP3Q9UFD9 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC23.55■■□□□ 1.36
RIMBP3Q9UFD9 OR3A1-202ENST00000615105 966 ntBASIC23.55■■□□□ 1.36
RIMBP3Q9UFD9 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC23.55■■□□□ 1.36
RIMBP3Q9UFD9 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RIMBP3Q9UFD9 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
RIMBP3Q9UFD9 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
RIMBP3Q9UFD9 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
RIMBP3Q9UFD9 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.54■■□□□ 1.36
RIMBP3Q9UFD9 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC23.54■■□□□ 1.36
RIMBP3Q9UFD9 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC23.54■■□□□ 1.36
RIMBP3Q9UFD9 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RIMBP3Q9UFD9 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RIMBP3Q9UFD9 RNVU1-8-201ENST00000364272 125 ntBASIC23.54■■□□□ 1.36
RIMBP3Q9UFD9 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC23.54■■□□□ 1.36
RIMBP3Q9UFD9 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC23.54■■□□□ 1.36
RIMBP3Q9UFD9 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC23.54■■□□□ 1.36
RIMBP3Q9UFD9 AC022121.1-201ENST00000484584 579 ntBASIC23.54■■□□□ 1.36
RIMBP3Q9UFD9 KRT18P37-201ENST00000520711 1282 ntBASIC23.54■■□□□ 1.36
RIMBP3Q9UFD9 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC23.54■■□□□ 1.36
RIMBP3Q9UFD9 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC23.54■■□□□ 1.36
RIMBP3Q9UFD9 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
RIMBP3Q9UFD9 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
RIMBP3Q9UFD9 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC23.54■■□□□ 1.36
RIMBP3Q9UFD9 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC23.53■■□□□ 1.36
RIMBP3Q9UFD9 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
RIMBP3Q9UFD9 AL157414.3-201ENST00000624276 1954 ntBASIC23.53■■□□□ 1.36
RIMBP3Q9UFD9 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RIMBP3Q9UFD9 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RIMBP3Q9UFD9 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RIMBP3Q9UFD9 THAP4-203ENST00000402545 833 ntTSL 5 BASIC23.53■■□□□ 1.36
RIMBP3Q9UFD9 KRT18P4-201ENST00000422599 1288 ntBASIC23.53■■□□□ 1.36
RIMBP3Q9UFD9 AC092910.2-201ENST00000491262 348 ntBASIC23.53■■□□□ 1.36
RIMBP3Q9UFD9 AP000920.1-201ENST00000531824 344 ntBASIC23.53■■□□□ 1.36
RIMBP3Q9UFD9 KRT8P1-201ENST00000557533 1207 ntBASIC23.53■■□□□ 1.36
RIMBP3Q9UFD9 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC23.53■■□□□ 1.36
RIMBP3Q9UFD9 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC23.53■■□□□ 1.36
RIMBP3Q9UFD9 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
RIMBP3Q9UFD9 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RIMBP3Q9UFD9 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RIMBP3Q9UFD9 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC23.53■■□□□ 1.36
RIMBP3Q9UFD9 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
RIMBP3Q9UFD9 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
RIMBP3Q9UFD9 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RIMBP3Q9UFD9 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC23.52■■□□□ 1.36
RIMBP3Q9UFD9 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
RIMBP3Q9UFD9 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC23.52■■□□□ 1.36
RIMBP3Q9UFD9 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
RIMBP3Q9UFD9 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC23.52■■□□□ 1.36
RIMBP3Q9UFD9 NRADDP-201ENST00000437305 691 ntBASIC23.52■■□□□ 1.36
RIMBP3Q9UFD9 RN7SL564P-201ENST00000496309 250 ntBASIC23.52■■□□□ 1.36
RIMBP3Q9UFD9 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC23.52■■□□□ 1.36
RIMBP3Q9UFD9 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC23.52■■□□□ 1.36
RIMBP3Q9UFD9 PLA2G4C-AS1-203ENST00000601950 454 ntTSL 3 BASIC23.52■■□□□ 1.36
RIMBP3Q9UFD9 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC23.52■■□□□ 1.36
RIMBP3Q9UFD9 AC027601.3-201ENST00000622907 509 ntBASIC23.52■■□□□ 1.36
RIMBP3Q9UFD9 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RIMBP3Q9UFD9 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RIMBP3Q9UFD9 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC23.52■■□□□ 1.36
RIMBP3Q9UFD9 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RIMBP3Q9UFD9 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
RIMBP3Q9UFD9 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
RIMBP3Q9UFD9 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RIMBP3Q9UFD9 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
RIMBP3Q9UFD9 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RIMBP3Q9UFD9 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC23.51■■□□□ 1.35
RIMBP3Q9UFD9 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC23.51■■□□□ 1.35
RIMBP3Q9UFD9 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC23.51■■□□□ 1.35
RIMBP3Q9UFD9 ALG1L15P-201ENST00000482834 794 ntBASIC23.51■■□□□ 1.35
RIMBP3Q9UFD9 MIR2278-201ENST00000516344 96 ntBASIC23.51■■□□□ 1.35
RIMBP3Q9UFD9 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
RIMBP3Q9UFD9 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RIMBP3Q9UFD9 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC23.51■■□□□ 1.35
RIMBP3Q9UFD9 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC23.51■■□□□ 1.35
RIMBP3Q9UFD9 MST1L-201ENST00000442552 2185 ntBASIC23.51■■□□□ 1.35
RIMBP3Q9UFD9 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC23.51■■□□□ 1.35
RIMBP3Q9UFD9 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RIMBP3Q9UFD9 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
RIMBP3Q9UFD9 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms