Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC18.34■□□□□ 0.53
CLIP2Q9UDT6 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CLIP2Q9UDT6 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLIP2Q9UDT6 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLIP2Q9UDT6 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC18.34■□□□□ 0.53
CLIP2Q9UDT6 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.34■□□□□ 0.53
CLIP2Q9UDT6 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLIP2Q9UDT6 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLIP2Q9UDT6 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLIP2Q9UDT6 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CLIP2Q9UDT6 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLIP2Q9UDT6 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CLIP2Q9UDT6 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLIP2Q9UDT6 AC079776.1-201ENST00000401540 1152 ntBASIC18.34■□□□□ 0.53
CLIP2Q9UDT6 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.34■□□□□ 0.53
CLIP2Q9UDT6 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLIP2Q9UDT6 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CLIP2Q9UDT6 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.34■□□□□ 0.53
CLIP2Q9UDT6 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.34■□□□□ 0.53
CLIP2Q9UDT6 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.34■□□□□ 0.53
CLIP2Q9UDT6 KRT17P8-201ENST00000540749 863 ntBASIC18.34■□□□□ 0.53
CLIP2Q9UDT6 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLIP2Q9UDT6 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.34■□□□□ 0.53
CLIP2Q9UDT6 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLIP2Q9UDT6 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.34■□□□□ 0.53
CLIP2Q9UDT6 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLIP2Q9UDT6 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLIP2Q9UDT6 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLIP2Q9UDT6 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLIP2Q9UDT6 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLIP2Q9UDT6 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.34■□□□□ 0.53
CLIP2Q9UDT6 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.34■□□□□ 0.53
CLIP2Q9UDT6 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLIP2Q9UDT6 INTS4P2-202ENST00000614726 2019 ntBASIC18.33■□□□□ 0.53
CLIP2Q9UDT6 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CLIP2Q9UDT6 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CLIP2Q9UDT6 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CLIP2Q9UDT6 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CLIP2Q9UDT6 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC18.33■□□□□ 0.53
CLIP2Q9UDT6 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.33■□□□□ 0.53
CLIP2Q9UDT6 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.33■□□□□ 0.53
CLIP2Q9UDT6 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CLIP2Q9UDT6 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CLIP2Q9UDT6 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CLIP2Q9UDT6 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLIP2Q9UDT6 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLIP2Q9UDT6 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.33■□□□□ 0.52
CLIP2Q9UDT6 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC18.33■□□□□ 0.52
CLIP2Q9UDT6 AL162726.2-201ENST00000438986 1017 ntBASIC18.33■□□□□ 0.52
CLIP2Q9UDT6 ATP5G2P4-201ENST00000442175 420 ntBASIC18.33■□□□□ 0.52
CLIP2Q9UDT6 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLIP2Q9UDT6 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.33■□□□□ 0.52
CLIP2Q9UDT6 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC18.33■□□□□ 0.52
CLIP2Q9UDT6 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.33■□□□□ 0.52
CLIP2Q9UDT6 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.33■□□□□ 0.52
CLIP2Q9UDT6 AC008735.3-201ENST00000596646 500 ntBASIC18.33■□□□□ 0.52
CLIP2Q9UDT6 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.33■□□□□ 0.52
CLIP2Q9UDT6 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.33■□□□□ 0.52
CLIP2Q9UDT6 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18.33■□□□□ 0.52
CLIP2Q9UDT6 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLIP2Q9UDT6 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLIP2Q9UDT6 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLIP2Q9UDT6 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLIP2Q9UDT6 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
CLIP2Q9UDT6 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLIP2Q9UDT6 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC18.33■□□□□ 0.52
CLIP2Q9UDT6 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLIP2Q9UDT6 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC18.33■□□□□ 0.52
CLIP2Q9UDT6 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLIP2Q9UDT6 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLIP2Q9UDT6 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLIP2Q9UDT6 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CLIP2Q9UDT6 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLIP2Q9UDT6 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC18.32■□□□□ 0.52
CLIP2Q9UDT6 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLIP2Q9UDT6 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLIP2Q9UDT6 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLIP2Q9UDT6 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC18.32■□□□□ 0.52
CLIP2Q9UDT6 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLIP2Q9UDT6 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLIP2Q9UDT6 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CLIP2Q9UDT6 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLIP2Q9UDT6 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.32■□□□□ 0.52
CLIP2Q9UDT6 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLIP2Q9UDT6 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLIP2Q9UDT6 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.32■□□□□ 0.52
CLIP2Q9UDT6 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.32■□□□□ 0.52
CLIP2Q9UDT6 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.32■□□□□ 0.52
CLIP2Q9UDT6 RPL13AP25-201ENST00000484130 612 ntBASIC18.32■□□□□ 0.52
CLIP2Q9UDT6 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC18.32■□□□□ 0.52
CLIP2Q9UDT6 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC18.32■□□□□ 0.52
CLIP2Q9UDT6 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.32■□□□□ 0.52
CLIP2Q9UDT6 IGHV3-71-201ENST00000523324 359 ntBASIC18.32■□□□□ 0.52
CLIP2Q9UDT6 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.32■□□□□ 0.52
CLIP2Q9UDT6 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.32■□□□□ 0.52
CLIP2Q9UDT6 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLIP2Q9UDT6 AC120045.2-201ENST00000567334 178 ntBASIC18.32■□□□□ 0.52
CLIP2Q9UDT6 AC124283.3-201ENST00000570869 594 ntBASIC18.32■□□□□ 0.52
CLIP2Q9UDT6 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CLIP2Q9UDT6 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms