Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 AC055876.2-201ENST00000531834 546 ntBASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 MIR3197-201ENST00000582241 73 ntBASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 AC027307.3-201ENST00000594262 1100 ntBASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 AC007541.1-201ENST00000570282 1469 ntBASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PARPBPQ9NWS1 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 AC036164.1-201ENST00000570544 333 ntBASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 AC099568.2-201ENST00000609194 695 ntBASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 AC127383.1-201ENST00000444697 1800 ntBASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PARPBPQ9NWS1 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
PARPBPQ9NWS1 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
PARPBPQ9NWS1 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
PARPBPQ9NWS1 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
PARPBPQ9NWS1 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 SLC7A15P-201ENST00000424028 1363 ntBASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 KRT18P64-201ENST00000434946 1219 ntBASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.89□□□□□ -0.19
PARPBPQ9NWS1 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms