Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2OQ9C0C9 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2OQ9C0C9 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2OQ9C0C9 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
UBE2OQ9C0C9 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2OQ9C0C9 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2OQ9C0C9 AC234782.1-201ENST00000451950 919 ntBASIC17.01■□□□□ 0.31
UBE2OQ9C0C9 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC17.01■□□□□ 0.31
UBE2OQ9C0C9 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC17.01■□□□□ 0.31
UBE2OQ9C0C9 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.01■□□□□ 0.31
UBE2OQ9C0C9 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2OQ9C0C9 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC17.01■□□□□ 0.31
UBE2OQ9C0C9 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC17.01■□□□□ 0.31
UBE2OQ9C0C9 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2OQ9C0C9 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.01■□□□□ 0.31
UBE2OQ9C0C9 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
UBE2OQ9C0C9 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.01■□□□□ 0.31
UBE2OQ9C0C9 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2OQ9C0C9 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2OQ9C0C9 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2OQ9C0C9 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
UBE2OQ9C0C9 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
UBE2OQ9C0C9 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.01■□□□□ 0.31
UBE2OQ9C0C9 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.01■□□□□ 0.31
UBE2OQ9C0C9 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2OQ9C0C9 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2OQ9C0C9 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBE2OQ9C0C9 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
UBE2OQ9C0C9 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
UBE2OQ9C0C9 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
UBE2OQ9C0C9 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17■□□□□ 0.31
UBE2OQ9C0C9 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17■□□□□ 0.31
UBE2OQ9C0C9 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17■□□□□ 0.31
UBE2OQ9C0C9 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
UBE2OQ9C0C9 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17■□□□□ 0.31
UBE2OQ9C0C9 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
UBE2OQ9C0C9 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC17■□□□□ 0.31
UBE2OQ9C0C9 AC011742.3-201ENST00000439053 820 ntBASIC17■□□□□ 0.31
UBE2OQ9C0C9 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17■□□□□ 0.31
UBE2OQ9C0C9 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC17■□□□□ 0.31
UBE2OQ9C0C9 AC012618.1-201ENST00000461223 412 ntBASIC17■□□□□ 0.31
UBE2OQ9C0C9 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC17■□□□□ 0.31
UBE2OQ9C0C9 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17■□□□□ 0.31
UBE2OQ9C0C9 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC17■□□□□ 0.31
UBE2OQ9C0C9 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC17■□□□□ 0.31
UBE2OQ9C0C9 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC17■□□□□ 0.31
UBE2OQ9C0C9 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC17■□□□□ 0.31
UBE2OQ9C0C9 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC17■□□□□ 0.31
UBE2OQ9C0C9 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17■□□□□ 0.31
UBE2OQ9C0C9 AC073352.2-201ENST00000609385 439 ntBASIC17■□□□□ 0.31
UBE2OQ9C0C9 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
UBE2OQ9C0C9 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBE2OQ9C0C9 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17■□□□□ 0.31
UBE2OQ9C0C9 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 AC098935.1-201ENST00000446057 611 ntBASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 KRT18P66-201ENST00000452970 1269 ntBASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 AC005740.2-201ENST00000511085 419 ntBASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 AC022217.1-201ENST00000521069 738 ntBASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 AC100757.4-201ENST00000626934 759 ntBASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.99■□□□□ 0.31
UBE2OQ9C0C9 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.98■□□□□ 0.31
UBE2OQ9C0C9 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBE2OQ9C0C9 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms