Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 SBF1P1-201ENST00000444527 5631 ntBASIC13.07□□□□□ -0.32
PCGF1Q9BSM1 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 AC005034.1-201ENST00000426657 489 ntBASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 AL353779.1-201ENST00000434793 351 ntBASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 AC093004.1-201ENST00000508850 424 ntBASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 AC025048.3-201ENST00000590609 569 ntBASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 SRD5A3P1-201ENST00000603021 949 ntBASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 AC012645.4-201ENST00000610691 1061 ntBASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 AC005702.4-201ENST00000618393 416 ntBASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 AL358472.5-202ENST00000641448 1267 ntBASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
PCGF1Q9BSM1 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PCGF1Q9BSM1 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PCGF1Q9BSM1 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
PCGF1Q9BSM1 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PCGF1Q9BSM1 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PCGF1Q9BSM1 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.05□□□□□ -0.32
PCGF1Q9BSM1 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.05□□□□□ -0.32
PCGF1Q9BSM1 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PCGF1Q9BSM1 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.05□□□□□ -0.32
PCGF1Q9BSM1 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
PCGF1Q9BSM1 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PCGF1Q9BSM1 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.05□□□□□ -0.32
PCGF1Q9BSM1 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
PCGF1Q9BSM1 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.05□□□□□ -0.32
PCGF1Q9BSM1 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
PCGF1Q9BSM1 AC087499.6-201ENST00000411576 835 ntBASIC13.05□□□□□ -0.32
PCGF1Q9BSM1 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.05□□□□□ -0.32
PCGF1Q9BSM1 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.05□□□□□ -0.32
PCGF1Q9BSM1 DFFBP1-201ENST00000433250 979 ntBASIC13.05□□□□□ -0.32
PCGF1Q9BSM1 HIST3H2BA-201ENST00000436555 524 ntBASIC13.05□□□□□ -0.32
PCGF1Q9BSM1 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.05□□□□□ -0.32
PCGF1Q9BSM1 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PCGF1Q9BSM1 AP005018.1-201ENST00000525475 301 ntBASIC13.05□□□□□ -0.32
PCGF1Q9BSM1 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.05□□□□□ -0.32
PCGF1Q9BSM1 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.05□□□□□ -0.32
PCGF1Q9BSM1 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms