Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
BBS4Q96RK4 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
BBS4Q96RK4 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.72□□□□□ -0.05
BBS4Q96RK4 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
BBS4Q96RK4 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.72□□□□□ -0.05
BBS4Q96RK4 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BBS4Q96RK4 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
BBS4Q96RK4 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
BBS4Q96RK4 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BBS4Q96RK4 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
BBS4Q96RK4 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
BBS4Q96RK4 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BBS4Q96RK4 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.71□□□□□ -0.05
BBS4Q96RK4 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
BBS4Q96RK4 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
BBS4Q96RK4 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BBS4Q96RK4 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
BBS4Q96RK4 AC023024.2-201ENST00000623561 1993 ntBASIC14.71□□□□□ -0.05
BBS4Q96RK4 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
BBS4Q96RK4 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.71□□□□□ -0.05
BBS4Q96RK4 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
BBS4Q96RK4 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
BBS4Q96RK4 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
BBS4Q96RK4 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BBS4Q96RK4 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.71□□□□□ -0.05
BBS4Q96RK4 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BBS4Q96RK4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
BBS4Q96RK4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BBS4Q96RK4 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
BBS4Q96RK4 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
BBS4Q96RK4 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
BBS4Q96RK4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
BBS4Q96RK4 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
BBS4Q96RK4 AL133267.1-201ENST00000398220 340 ntBASIC14.71□□□□□ -0.05
BBS4Q96RK4 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.71□□□□□ -0.05
BBS4Q96RK4 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.71□□□□□ -0.05
BBS4Q96RK4 RPL13P2-201ENST00000440687 659 ntBASIC14.71□□□□□ -0.05
BBS4Q96RK4 TIMM17BP1-201ENST00000545713 516 ntBASIC14.71□□□□□ -0.05
BBS4Q96RK4 AC015910.1-201ENST00000579400 975 ntBASIC14.71□□□□□ -0.05
BBS4Q96RK4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.71□□□□□ -0.05
BBS4Q96RK4 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.71□□□□□ -0.05
BBS4Q96RK4 GPALPP1-207ENST00000611650 899 ntBASIC14.71□□□□□ -0.05
BBS4Q96RK4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
BBS4Q96RK4 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
BBS4Q96RK4 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
BBS4Q96RK4 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.71□□□□□ -0.05
BBS4Q96RK4 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BBS4Q96RK4 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.71□□□□□ -0.05
BBS4Q96RK4 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
BBS4Q96RK4 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
BBS4Q96RK4 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.71□□□□□ -0.05
BBS4Q96RK4 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
BBS4Q96RK4 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.71□□□□□ -0.06
BBS4Q96RK4 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
BBS4Q96RK4 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
BBS4Q96RK4 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
BBS4Q96RK4 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
BBS4Q96RK4 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.71□□□□□ -0.06
BBS4Q96RK4 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.71□□□□□ -0.06
BBS4Q96RK4 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
BBS4Q96RK4 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
BBS4Q96RK4 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
BBS4Q96RK4 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
BBS4Q96RK4 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
BBS4Q96RK4 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BBS4Q96RK4 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BBS4Q96RK4 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.7□□□□□ -0.06
BBS4Q96RK4 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
BBS4Q96RK4 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BBS4Q96RK4 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
BBS4Q96RK4 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.7□□□□□ -0.06
BBS4Q96RK4 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BBS4Q96RK4 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.7□□□□□ -0.06
BBS4Q96RK4 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
BBS4Q96RK4 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
BBS4Q96RK4 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
BBS4Q96RK4 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BBS4Q96RK4 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.7□□□□□ -0.06
BBS4Q96RK4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
BBS4Q96RK4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
BBS4Q96RK4 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
BBS4Q96RK4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.7□□□□□ -0.06
BBS4Q96RK4 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BBS4Q96RK4 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.7□□□□□ -0.06
BBS4Q96RK4 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.7□□□□□ -0.06
BBS4Q96RK4 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.7□□□□□ -0.06
BBS4Q96RK4 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.7□□□□□ -0.06
BBS4Q96RK4 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
BBS4Q96RK4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.7□□□□□ -0.06
BBS4Q96RK4 AC106028.4-201ENST00000614509 607 ntBASIC14.7□□□□□ -0.06
BBS4Q96RK4 AL390754.1-201ENST00000619088 582 ntBASIC14.7□□□□□ -0.06
BBS4Q96RK4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.7□□□□□ -0.06
BBS4Q96RK4 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
BBS4Q96RK4 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
BBS4Q96RK4 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
BBS4Q96RK4 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.7□□□□□ -0.06
BBS4Q96RK4 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
BBS4Q96RK4 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.7□□□□□ -0.06
BBS4Q96RK4 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
BBS4Q96RK4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms