Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.72□□□□□ -0.21
APH1AQ96BI3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
APH1AQ96BI3 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APH1AQ96BI3 KRT8P22-201ENST00000562317 1415 ntBASIC13.72□□□□□ -0.21
APH1AQ96BI3 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
APH1AQ96BI3 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
APH1AQ96BI3 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
APH1AQ96BI3 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
APH1AQ96BI3 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APH1AQ96BI3 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.71□□□□□ -0.21
APH1AQ96BI3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
APH1AQ96BI3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APH1AQ96BI3 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APH1AQ96BI3 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APH1AQ96BI3 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
APH1AQ96BI3 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.71□□□□□ -0.21
APH1AQ96BI3 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
APH1AQ96BI3 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APH1AQ96BI3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
APH1AQ96BI3 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APH1AQ96BI3 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APH1AQ96BI3 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.71□□□□□ -0.21
APH1AQ96BI3 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.71□□□□□ -0.21
APH1AQ96BI3 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.71□□□□□ -0.21
APH1AQ96BI3 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.71□□□□□ -0.21
APH1AQ96BI3 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.71□□□□□ -0.21
APH1AQ96BI3 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APH1AQ96BI3 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.71□□□□□ -0.21
APH1AQ96BI3 AC026410.3-201ENST00000514280 936 ntBASIC13.71□□□□□ -0.21
APH1AQ96BI3 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.71□□□□□ -0.21
APH1AQ96BI3 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.71□□□□□ -0.21
APH1AQ96BI3 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.71□□□□□ -0.21
APH1AQ96BI3 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.71□□□□□ -0.21
APH1AQ96BI3 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.71□□□□□ -0.21
APH1AQ96BI3 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.71□□□□□ -0.21
APH1AQ96BI3 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.71□□□□□ -0.21
APH1AQ96BI3 AC093813.1-201ENST00000605066 256 ntBASIC13.71□□□□□ -0.21
APH1AQ96BI3 AC107373.2-201ENST00000607735 490 ntBASIC13.71□□□□□ -0.21
APH1AQ96BI3 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.71□□□□□ -0.21
APH1AQ96BI3 CU634019.7-201ENST00000624153 1185 ntBASIC13.71□□□□□ -0.21
APH1AQ96BI3 FP236241.2-201ENST00000624906 1185 ntBASIC13.71□□□□□ -0.21
APH1AQ96BI3 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APH1AQ96BI3 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
APH1AQ96BI3 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
APH1AQ96BI3 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APH1AQ96BI3 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
APH1AQ96BI3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APH1AQ96BI3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.71□□□□□ -0.21
APH1AQ96BI3 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
APH1AQ96BI3 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APH1AQ96BI3 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
APH1AQ96BI3 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
APH1AQ96BI3 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.71□□□□□ -0.21
APH1AQ96BI3 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APH1AQ96BI3 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.71□□□□□ -0.21
APH1AQ96BI3 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
APH1AQ96BI3 DRD5P1-201ENST00000456605 1438 ntBASIC13.71□□□□□ -0.22
APH1AQ96BI3 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.71□□□□□ -0.22
APH1AQ96BI3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
APH1AQ96BI3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
APH1AQ96BI3 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
APH1AQ96BI3 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
APH1AQ96BI3 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.71□□□□□ -0.22
APH1AQ96BI3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
APH1AQ96BI3 AC132872.4-202ENST00000622924 2756 ntBASIC13.71□□□□□ -0.22
APH1AQ96BI3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.71□□□□□ -0.22
APH1AQ96BI3 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
APH1AQ96BI3 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
APH1AQ96BI3 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.71□□□□□ -0.22
APH1AQ96BI3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APH1AQ96BI3 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APH1AQ96BI3 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
APH1AQ96BI3 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.7□□□□□ -0.22
APH1AQ96BI3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.7□□□□□ -0.22
APH1AQ96BI3 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
APH1AQ96BI3 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APH1AQ96BI3 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
APH1AQ96BI3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.7□□□□□ -0.22
APH1AQ96BI3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APH1AQ96BI3 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.7□□□□□ -0.22
APH1AQ96BI3 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APH1AQ96BI3 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
APH1AQ96BI3 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APH1AQ96BI3 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APH1AQ96BI3 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APH1AQ96BI3 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
APH1AQ96BI3 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.7□□□□□ -0.22
APH1AQ96BI3 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
APH1AQ96BI3 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.7□□□□□ -0.22
APH1AQ96BI3 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.7□□□□□ -0.22
APH1AQ96BI3 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APH1AQ96BI3 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.7□□□□□ -0.22
APH1AQ96BI3 ENPP7P5-201ENST00000541031 1031 ntBASIC13.7□□□□□ -0.22
APH1AQ96BI3 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.7□□□□□ -0.22
APH1AQ96BI3 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.7□□□□□ -0.22
APH1AQ96BI3 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.7□□□□□ -0.22
APH1AQ96BI3 AC124283.3-201ENST00000570869 594 ntBASIC13.7□□□□□ -0.22
APH1AQ96BI3 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.7□□□□□ -0.22
APH1AQ96BI3 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.7□□□□□ -0.22
APH1AQ96BI3 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms