Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 SLC7A15P-201ENST00000424028 1363 ntBASIC16.45■□□□□ 0.22
SHC3Q92529 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.45■□□□□ 0.22
SHC3Q92529 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SHC3Q92529 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SHC3Q92529 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHC3Q92529 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
SHC3Q92529 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.45■□□□□ 0.22
SHC3Q92529 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.45■□□□□ 0.22
SHC3Q92529 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SHC3Q92529 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SHC3Q92529 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHC3Q92529 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHC3Q92529 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHC3Q92529 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHC3Q92529 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.45■□□□□ 0.22
SHC3Q92529 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHC3Q92529 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.45■□□□□ 0.22
SHC3Q92529 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.45■□□□□ 0.22
SHC3Q92529 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHC3Q92529 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHC3Q92529 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHC3Q92529 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SHC3Q92529 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHC3Q92529 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.45■□□□□ 0.22
SHC3Q92529 AC099063.4-201ENST00000641099 1602 ntBASIC16.45■□□□□ 0.22
SHC3Q92529 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHC3Q92529 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHC3Q92529 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHC3Q92529 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.44■□□□□ 0.22
SHC3Q92529 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SHC3Q92529 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.44■□□□□ 0.22
SHC3Q92529 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHC3Q92529 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHC3Q92529 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHC3Q92529 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
SHC3Q92529 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.44■□□□□ 0.22
SHC3Q92529 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
SHC3Q92529 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.44■□□□□ 0.22
SHC3Q92529 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.44■□□□□ 0.22
SHC3Q92529 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SHC3Q92529 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SHC3Q92529 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.44■□□□□ 0.22
SHC3Q92529 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.44■□□□□ 0.22
SHC3Q92529 VDAC1P7-201ENST00000462417 847 ntBASIC16.44■□□□□ 0.22
SHC3Q92529 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SHC3Q92529 SERBP1P5-201ENST00000510079 1181 ntBASIC16.44■□□□□ 0.22
SHC3Q92529 AC055876.2-201ENST00000531834 546 ntBASIC16.44■□□□□ 0.22
SHC3Q92529 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.44■□□□□ 0.22
SHC3Q92529 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.44■□□□□ 0.22
SHC3Q92529 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.44■□□□□ 0.22
SHC3Q92529 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.44■□□□□ 0.22
SHC3Q92529 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SHC3Q92529 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.44■□□□□ 0.22
SHC3Q92529 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHC3Q92529 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.44■□□□□ 0.22
SHC3Q92529 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHC3Q92529 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SHC3Q92529 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHC3Q92529 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SHC3Q92529 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.44■□□□□ 0.22
SHC3Q92529 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.44■□□□□ 0.22
SHC3Q92529 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHC3Q92529 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHC3Q92529 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
SHC3Q92529 AL360270.3-201ENST00000609118 1348 ntBASIC16.44■□□□□ 0.22
SHC3Q92529 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.44■□□□□ 0.22
SHC3Q92529 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHC3Q92529 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHC3Q92529 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHC3Q92529 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHC3Q92529 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHC3Q92529 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.43■□□□□ 0.22
SHC3Q92529 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.43■□□□□ 0.22
SHC3Q92529 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
SHC3Q92529 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHC3Q92529 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHC3Q92529 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
SHC3Q92529 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SHC3Q92529 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.43■□□□□ 0.22
SHC3Q92529 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SHC3Q92529 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHC3Q92529 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.43■□□□□ 0.22
SHC3Q92529 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.43■□□□□ 0.22
SHC3Q92529 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.43■□□□□ 0.22
SHC3Q92529 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.43■□□□□ 0.22
SHC3Q92529 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SHC3Q92529 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.43■□□□□ 0.22
SHC3Q92529 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SHC3Q92529 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.43■□□□□ 0.22
SHC3Q92529 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHC3Q92529 MIR8072-201ENST00000614241 80 ntBASIC16.43■□□□□ 0.22
SHC3Q92529 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.43■□□□□ 0.22
SHC3Q92529 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SHC3Q92529 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.43■□□□□ 0.22
SHC3Q92529 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
SHC3Q92529 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.43■□□□□ 0.22
SHC3Q92529 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.43■□□□□ 0.22
SHC3Q92529 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHC3Q92529 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHC3Q92529 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms