Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
TRIM41Q8WV44 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
TRIM41Q8WV44 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC26.28■■□□□ 1.8
TRIM41Q8WV44 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC26.28■■□□□ 1.8
TRIM41Q8WV44 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC26.28■■□□□ 1.8
TRIM41Q8WV44 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC26.28■■□□□ 1.8
TRIM41Q8WV44 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC26.28■■□□□ 1.8
TRIM41Q8WV44 NSD1-211ENST00000511258 809 ntTSL 3 BASIC26.28■■□□□ 1.8
TRIM41Q8WV44 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC26.28■■□□□ 1.8
TRIM41Q8WV44 DNM1P51-201ENST00000558149 522 ntBASIC26.28■■□□□ 1.8
TRIM41Q8WV44 HNRNPA1P48-202ENST00000565308 961 ntBASIC26.28■■□□□ 1.8
TRIM41Q8WV44 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC26.28■■□□□ 1.8
TRIM41Q8WV44 CLUHP6-201ENST00000580789 941 ntBASIC26.28■■□□□ 1.8
TRIM41Q8WV44 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
TRIM41Q8WV44 AC107373.2-201ENST00000607735 490 ntBASIC26.28■■□□□ 1.8
TRIM41Q8WV44 WT1-AS_6.1-201ENST00000614919 121 ntBASIC26.28■■□□□ 1.8
TRIM41Q8WV44 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC26.28■■□□□ 1.8
TRIM41Q8WV44 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
TRIM41Q8WV44 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TRIM41Q8WV44 AC008894.3-201ENST00000624324 3103 ntBASIC26.28■■□□□ 1.8
TRIM41Q8WV44 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
TRIM41Q8WV44 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC26.28■■□□□ 1.8
TRIM41Q8WV44 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TRIM41Q8WV44 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TRIM41Q8WV44 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TRIM41Q8WV44 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC26.28■■□□□ 1.8
TRIM41Q8WV44 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRIM41Q8WV44 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRIM41Q8WV44 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRIM41Q8WV44 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
TRIM41Q8WV44 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRIM41Q8WV44 AL157792.1-201ENST00000488281 530 ntBASIC26.27■■□□□ 1.8
TRIM41Q8WV44 AC106760.1-201ENST00000508690 800 ntBASIC26.27■■□□□ 1.8
TRIM41Q8WV44 ALG1L13P-202ENST00000519320 584 ntBASIC26.27■■□□□ 1.8
TRIM41Q8WV44 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC26.27■■□□□ 1.8
TRIM41Q8WV44 ACR-203ENST00000529621 708 ntTSL 5 BASIC26.27■■□□□ 1.8
TRIM41Q8WV44 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC26.27■■□□□ 1.8
TRIM41Q8WV44 ENPP7P5-201ENST00000541031 1031 ntBASIC26.27■■□□□ 1.8
TRIM41Q8WV44 RN7SL574P-201ENST00000581512 297 ntBASIC26.27■■□□□ 1.8
TRIM41Q8WV44 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
TRIM41Q8WV44 AC005252.2-201ENST00000624630 1141 ntBASIC26.27■■□□□ 1.8
TRIM41Q8WV44 AC127024.7-201ENST00000625101 200 ntBASIC26.27■■□□□ 1.8
TRIM41Q8WV44 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRIM41Q8WV44 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRIM41Q8WV44 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC26.27■■□□□ 1.8
TRIM41Q8WV44 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC26.27■■□□□ 1.8
TRIM41Q8WV44 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
TRIM41Q8WV44 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRIM41Q8WV44 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRIM41Q8WV44 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRIM41Q8WV44 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC26.27■■□□□ 1.8
TRIM41Q8WV44 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRIM41Q8WV44 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRIM41Q8WV44 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
TRIM41Q8WV44 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRIM41Q8WV44 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM41Q8WV44 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM41Q8WV44 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM41Q8WV44 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC26.26■■□□□ 1.79
TRIM41Q8WV44 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
TRIM41Q8WV44 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC26.26■■□□□ 1.79
TRIM41Q8WV44 USE1-206ENST00000595101 1776 ntTSL 2 BASIC26.26■■□□□ 1.79
TRIM41Q8WV44 AC022188.1-201ENST00000620960 1664 ntBASIC26.26■■□□□ 1.79
TRIM41Q8WV44 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM41Q8WV44 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM41Q8WV44 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC26.26■■□□□ 1.79
TRIM41Q8WV44 AL139008.1-201ENST00000437894 228 ntBASIC26.26■■□□□ 1.79
TRIM41Q8WV44 Z97180.1-201ENST00000445173 988 ntBASIC26.26■■□□□ 1.79
TRIM41Q8WV44 RPSAP36-202ENST00000494591 1261 ntBASIC26.26■■□□□ 1.79
TRIM41Q8WV44 NKG7-204ENST00000595217 816 ntTSL 2 BASIC26.26■■□□□ 1.79
TRIM41Q8WV44 AC132192.2-201ENST00000596206 1147 ntBASIC26.26■■□□□ 1.79
TRIM41Q8WV44 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM41Q8WV44 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM41Q8WV44 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC26.26■■□□□ 1.79
TRIM41Q8WV44 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM41Q8WV44 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC26.26■■□□□ 1.79
TRIM41Q8WV44 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM41Q8WV44 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TRIM41Q8WV44 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
TRIM41Q8WV44 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TRIM41Q8WV44 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
TRIM41Q8WV44 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
TRIM41Q8WV44 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TRIM41Q8WV44 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC26.25■■□□□ 1.79
TRIM41Q8WV44 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TRIM41Q8WV44 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
TRIM41Q8WV44 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TRIM41Q8WV44 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
TRIM41Q8WV44 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TRIM41Q8WV44 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC26.25■■□□□ 1.79
TRIM41Q8WV44 AC016700.1-201ENST00000429424 312 ntBASIC26.25■■□□□ 1.79
TRIM41Q8WV44 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC26.25■■□□□ 1.79
TRIM41Q8WV44 PTPA-218ENST00000435132 618 ntTSL 2 BASIC26.25■■□□□ 1.79
TRIM41Q8WV44 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC26.25■■□□□ 1.79
TRIM41Q8WV44 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC26.25■■□□□ 1.79
TRIM41Q8WV44 AL596276.2-201ENST00000447525 331 ntBASIC26.25■■□□□ 1.79
TRIM41Q8WV44 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC26.25■■□□□ 1.79
TRIM41Q8WV44 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC26.25■■□□□ 1.79
TRIM41Q8WV44 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC26.25■■□□□ 1.79
TRIM41Q8WV44 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms