Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.41□□□□□ -0.1
BEST3Q8N1M1 USP32P1-208ENST00000506594 1164 ntBASIC14.41□□□□□ -0.1
BEST3Q8N1M1 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.41□□□□□ -0.1
BEST3Q8N1M1 TDH-203ENST00000531764 1110 ntBASIC14.41□□□□□ -0.1
BEST3Q8N1M1 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.41□□□□□ -0.1
BEST3Q8N1M1 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.41□□□□□ -0.1
BEST3Q8N1M1 BTNL10-201ENST00000595971 695 ntBASIC14.41□□□□□ -0.1
BEST3Q8N1M1 AC000095.1-201ENST00000603208 874 ntBASIC14.41□□□□□ -0.1
BEST3Q8N1M1 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.41□□□□□ -0.1
BEST3Q8N1M1 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.41□□□□□ -0.1
BEST3Q8N1M1 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
BEST3Q8N1M1 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
BEST3Q8N1M1 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BEST3Q8N1M1 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BEST3Q8N1M1 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
BEST3Q8N1M1 AC126177.1-201ENST00000547829 2218 ntBASIC14.41□□□□□ -0.1
BEST3Q8N1M1 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BEST3Q8N1M1 LINC02447-202ENST00000501888 2146 ntBASIC14.41□□□□□ -0.1
BEST3Q8N1M1 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BEST3Q8N1M1 AC099063.4-201ENST00000641099 1602 ntBASIC14.41□□□□□ -0.1
BEST3Q8N1M1 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
BEST3Q8N1M1 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
BEST3Q8N1M1 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BEST3Q8N1M1 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BEST3Q8N1M1 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
BEST3Q8N1M1 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.4□□□□□ -0.1
BEST3Q8N1M1 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
BEST3Q8N1M1 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.4□□□□□ -0.1
BEST3Q8N1M1 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
BEST3Q8N1M1 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BEST3Q8N1M1 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.4□□□□□ -0.1
BEST3Q8N1M1 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
BEST3Q8N1M1 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.4□□□□□ -0.1
BEST3Q8N1M1 AC018665.1-201ENST00000622927 1362 ntBASIC14.4□□□□□ -0.1
BEST3Q8N1M1 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BEST3Q8N1M1 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BEST3Q8N1M1 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.4□□□□□ -0.1
BEST3Q8N1M1 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.4□□□□□ -0.1
BEST3Q8N1M1 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
BEST3Q8N1M1 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.4□□□□□ -0.1
BEST3Q8N1M1 AC022210.1-201ENST00000449856 793 ntBASIC14.4□□□□□ -0.1
BEST3Q8N1M1 CROCCP4-201ENST00000457096 498 ntBASIC14.4□□□□□ -0.1
BEST3Q8N1M1 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BEST3Q8N1M1 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
BEST3Q8N1M1 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.4□□□□□ -0.1
BEST3Q8N1M1 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.4□□□□□ -0.1
BEST3Q8N1M1 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.4□□□□□ -0.1
BEST3Q8N1M1 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.4□□□□□ -0.1
BEST3Q8N1M1 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.4□□□□□ -0.1
BEST3Q8N1M1 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.4□□□□□ -0.1
BEST3Q8N1M1 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BEST3Q8N1M1 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
BEST3Q8N1M1 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
BEST3Q8N1M1 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BEST3Q8N1M1 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.4□□□□□ -0.1
BEST3Q8N1M1 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
BEST3Q8N1M1 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
BEST3Q8N1M1 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
BEST3Q8N1M1 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
BEST3Q8N1M1 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.39□□□□□ -0.11
BEST3Q8N1M1 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BEST3Q8N1M1 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
BEST3Q8N1M1 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
BEST3Q8N1M1 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
BEST3Q8N1M1 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.39□□□□□ -0.11
BEST3Q8N1M1 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
BEST3Q8N1M1 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
BEST3Q8N1M1 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BEST3Q8N1M1 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
BEST3Q8N1M1 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
BEST3Q8N1M1 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BEST3Q8N1M1 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
BEST3Q8N1M1 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
BEST3Q8N1M1 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
BEST3Q8N1M1 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
BEST3Q8N1M1 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
BEST3Q8N1M1 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BEST3Q8N1M1 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
BEST3Q8N1M1 ACTG1P3-201ENST00000431775 1114 ntBASIC14.39□□□□□ -0.11
BEST3Q8N1M1 KRT43P-201ENST00000434019 910 ntBASIC14.39□□□□□ -0.11
BEST3Q8N1M1 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
BEST3Q8N1M1 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
BEST3Q8N1M1 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
BEST3Q8N1M1 SLC25A47P1-201ENST00000531577 414 ntBASIC14.39□□□□□ -0.11
BEST3Q8N1M1 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.39□□□□□ -0.11
BEST3Q8N1M1 ENPP7P5-201ENST00000541031 1031 ntBASIC14.39□□□□□ -0.11
BEST3Q8N1M1 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.39□□□□□ -0.11
BEST3Q8N1M1 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
BEST3Q8N1M1 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.39□□□□□ -0.11
BEST3Q8N1M1 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.39□□□□□ -0.11
BEST3Q8N1M1 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.39□□□□□ -0.11
BEST3Q8N1M1 AC233724.13-201ENST00000598383 410 ntBASIC14.39□□□□□ -0.11
BEST3Q8N1M1 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.39□□□□□ -0.11
BEST3Q8N1M1 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.39□□□□□ -0.11
BEST3Q8N1M1 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
BEST3Q8N1M1 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.39□□□□□ -0.11
BEST3Q8N1M1 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BEST3Q8N1M1 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
BEST3Q8N1M1 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.39□□□□□ -0.11
BEST3Q8N1M1 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms